@@ -1,53 +1,48 @@
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using AutoMapper;
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using IRaCIS.Application.Contracts;
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using IRaCIS.Application.Interfaces;
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using IRaCIS.Core.API._ServiceExtensions.NewtonsoftJson;
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using IRaCIS.Core.Application.Contracts;
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using IRaCIS.Core.Application.Contracts.DTO;
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using IRaCIS.Core.Application.Helper;
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using IRaCIS.Core.Application.MassTransit.Command;
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using IRaCIS.Core.Domain.Models;
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using IRaCIS.Core.Domain.Share;
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using MassTransit;
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using Microsoft.AspNetCore.Hosting;
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using Microsoft.AspNetCore.Mvc;
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using Microsoft.Extensions.Hosting;
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using Microsoft.Extensions.Localization;
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using Microsoft.Extensions.Options;
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using Newtonsoft.Json;
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using System.IO;
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using System.Text;
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namespace IRaCIS.Core.Application.MassTransit.Consumer
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{
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public class ConsistencyCheckConsumer : IConsumer<ConsistenCheckCommand>
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public class ConsistencyCheckConsumer(
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IRepository<DicomStudy> _studyRepository,
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IUserInfo _userInfo,
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IRepository<Subject> _subjectRepository,
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IRepository<NoneDicomStudy> _noneDicomStudyRepository,
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IRepository<SubjectVisit> _subjectVisitRepository,
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IRepository<Dictionary> _dictionaryRepository,
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IOSSService _oSSService,
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IMapper _mapper,
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IDictionaryService _dictionaryService,
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IRepository<CommonDocument> _commonDocumentRepository,
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IStringLocalizer _localizer,
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IWebHostEnvironment _hostEnvironment,
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IRepository<InspectionFile> _inspectionFileRepository
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) : IConsumer<ConsistenCheckCommand>, IConsumer<ConsistenFullCheckCommand>
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{
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private readonly IRepository<DicomStudy> _studyRepository;
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private readonly IUserInfo _userInfo;
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private readonly IRepository<Subject> _subjectRepository;
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private readonly IRepository<SubjectVisit> _subjectVisitRepository;
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private readonly IRepository<TrialSite> _trialSiteRepository;
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private readonly IMapper _mapper;
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private readonly IRepository<NoneDicomStudy> _noneDicomStudyRepository;
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public IStringLocalizer _localizer { get; set; }
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private readonly SystemEmailSendConfig _systemEmailConfig;
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private readonly IRepository<Dictionary> _dictionaryRepository;
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/// <summary>
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/// 构造函数注入
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/// </summary>
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public ConsistencyCheckConsumer(IRepository<DicomStudy> studyRepository, IUserInfo userInfo,
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IRepository<Subject> subjectRepository, IRepository<SubjectVisit> subjectVisitRepository,
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IRepository<TrialSite> trialSiteRepository, IRepository<NoneDicomStudy> noneDicomStudyRepository,
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IMapper mapper, IStringLocalizer localizer, IOptionsMonitor<SystemEmailSendConfig> systemEmailConfig, IRepository<Dictionary> dictionaryRepository)
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{
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_noneDicomStudyRepository = noneDicomStudyRepository;
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_studyRepository = studyRepository;
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_userInfo = userInfo;
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_subjectRepository = subjectRepository;
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_subjectVisitRepository = subjectVisitRepository;
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_trialSiteRepository = trialSiteRepository;
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_mapper = mapper;
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_localizer = localizer;
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_systemEmailConfig = systemEmailConfig.CurrentValue;
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_dictionaryRepository = dictionaryRepository;
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}
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@@ -67,8 +62,8 @@ namespace IRaCIS.Core.Application.MassTransit.Consumer
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//subjectVisitLambda2= subjectVisitLambda2.And(x => x.CheckState == CheckStateEnum.ToCheck && x.AuditState == AuditStateEnum.QCPassed || (x.CheckState == CheckStateEnum.CVIng && x.AuditState == AuditStateEnum.QCPassed));
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Expression<Func<SubjectVisit, bool>> subjectVisitLambda = x => x.TrialId == trialId && x.Subject.IsSubjectQuit == false &&
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(x.CheckState == CheckStateEnum.ToCheck && x.AuditState == AuditStateEnum.QCPassed || (x.CheckState == CheckStateEnum.CVIng && x.AuditState == AuditStateEnum.QCPassed));
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Expression<Func<SubjectVisit, bool>> subjectVisitLambda = x => x.TrialId == trialId && x.Subject.IsSubjectQuit == false && x.AuditState == AuditStateEnum.QCPassed &&
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(x.CheckState == CheckStateEnum.ToCheck || x.CheckState == CheckStateEnum.CVIng);
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var dicomQuery = from sv in _subjectVisitRepository.Where(subjectVisitLambda)
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join subject in _subjectRepository.AsQueryable() on sv.SubjectId equals subject.Id
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@@ -301,12 +296,159 @@ namespace IRaCIS.Core.Application.MassTransit.Consumer
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}
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await _subjectVisitRepository.SaveChangesAsync();
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//await context.RespondAsync<ConsistenCheckResult>(new
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//{
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//});
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}
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public async Task Consume(ConsumeContext<ConsistenFullCheckCommand> context)
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{
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var inspectionFileId = context.Message.InspectionFileId;
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var trialId = context.Message.TrialId;
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//系统定义MRI 到底是MR 还是MRI
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var mriModality = await _dictionaryRepository.Where(t => t.Parent.Code == "Modality").Where(t => t.Code == "MRI").Select(t => t.Value).FirstNotNullAsync();
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//处理Excel大小写
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context.Message.ETCList.ForEach(t => { t.Modality = t.Modality.ToUpper().Trim(); t.StudyDate = Convert.ToDateTime(t.StudyDate).ToString("yyyy-MM-dd"); t.SiteCode = t.SiteCode.ToUpper().Trim(); t.VisitName = t.VisitName.ToUpper().Trim(); t.SubjectCode = t.SubjectCode.ToUpper().Trim(); });
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var etcList = context.Message.ETCList;
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Expression<Func<SubjectVisit, bool>> subjectVisitLambda = x => x.TrialId == trialId /*&& x.Subject.IsSubjectQuit == false*/ && x.AuditState == AuditStateEnum.QCPassed &&
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(x.CheckState == CheckStateEnum.CVPassed);
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var dicomQuery = from sv in _subjectVisitRepository.Where(subjectVisitLambda)
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join subject in _subjectRepository.AsQueryable() on sv.SubjectId equals subject.Id
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join study in _studyRepository.AsQueryable() on sv.Id equals study.SubjectVisitId
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select new CheckDBModel()
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{
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SubjectStatus = sv.Subject.Status,
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SubjectVisitId = sv.Id,
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SiteCode = sv.TrialSite.TrialSiteCode,
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StudyDate = study.StudyTime == null ? string.Empty : ((DateTime)study.StudyTime).ToString("yyyy-MM-dd"),
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StudyId = study.Id,
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Modality = study.ModalityForEdit,
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SubjectCode = subject.Code,
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VisitName = sv.VisitName,
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};
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var noneDicomQuey = from sv in _subjectVisitRepository.Where(subjectVisitLambda)
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join subject in _subjectRepository.AsQueryable() on sv.SubjectId equals subject.Id
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join noneDicomStudy in _noneDicomStudyRepository.AsQueryable() on sv.Id equals noneDicomStudy.SubjectVisitId
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select new CheckDBModel()
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{
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SubjectStatus = sv.Subject.Status,
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SubjectVisitId = sv.Id,
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SiteCode = sv.TrialSite.TrialSiteCode,
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StudyDate = noneDicomStudy.ImageDate.ToString("yyyy-MM-dd"),
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StudyId = noneDicomStudy.Id,
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Modality = noneDicomStudy.Modality,
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SubjectCode = subject.Code,
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VisitName = sv.VisitName,
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};
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var dbList = (await dicomQuery.ToListAsync()).Union(await noneDicomQuey.ToListAsync()).ToList();
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//处理数据库 大小写
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dbList.ForEach(t => { t.Modality = t.Modality.ToUpper().Trim(); t.SiteCode = t.SiteCode.ToUpper().Trim(); t.VisitName = t.VisitName.ToUpper().Trim(); t.SubjectCode = t.SubjectCode.ToUpper().Trim(); });
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var dbCheckList = _mapper.Map<List<CheckViewModel>>(dbList);
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//按照Excel数据访视分组 按照数据库的数据 一个个的访视对比
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var svExcelGroup = etcList.GroupBy(t => new { t.SiteCode, t.SubjectCode, t.VisitName })
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.Select(g => new { g.Key.SubjectCode, g.Key.VisitName, g.Key.SiteCode, ExcelStudyList = g.ToList() }).ToList();
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var fullCheckResultList = new List<FullCheckResult>();
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foreach (var sv in svExcelGroup)
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{
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//Excel 的数据 在IRC 中可以找到该访视（一致性核查中，或者待核查）
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if (dbCheckList.Any(t => t.SubjectCode == sv.SubjectCode && t.SiteCode == sv.SiteCode && t.VisitName == sv.VisitName))
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{
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var dbVisitStudyList = dbList.Where(t => t.SubjectCode == sv.SubjectCode && t.SiteCode == sv.SiteCode && t.VisitName == sv.VisitName).ToList();
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//找到etc 当前visit site 和subject 一致的检查列表
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var etcVisitStudyList = etcList.Where(t => t.SubjectCode == sv.SubjectCode && t.SiteCode == sv.SiteCode && t.VisitName == sv.VisitName).ToList();
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//以我们系统数据库为准 ，判断是MR 还是MRI, 把Excel 里的MR 或者MRI 处理成一致，MR MRI 是一致的
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foreach (var item in etcVisitStudyList)
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{
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if (item.Modality == "MR" || item.Modality == "MRI")
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{
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item.Modality = mriModality;
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}
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}
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//etc 和数据库 并集
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var unionList = dbVisitStudyList.Union(etcVisitStudyList);
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// 数据库存在
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var dbExceptExcel = dbVisitStudyList.Except(etcVisitStudyList);
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// excel 存在
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var excelExceptDB = etcVisitStudyList.Except(dbCheckList);
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var dbCurrentVisitFirst = dbCheckList.First();
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//ETC 和系统的完全一致 两者没有差别
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if (dbExceptExcel.Count() == 0 && excelExceptDB.Count() == 0)
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{
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//每个受试者每个访视加一条记录
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fullCheckResultList.Add(new FullCheckResult()
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{
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SubjectStatus = dbCurrentVisitFirst.SubjectStatus,
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CheckTime = DateTime.Now,
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SiteCode = dbCurrentVisitFirst.SiteCode,
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SubjectCode = dbCurrentVisitFirst.SubjectCode,
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VisitName = dbCurrentVisitFirst.VisitName,
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Modality = string.Join('、', dbVisitStudyList.Select(t => t.Modality)),
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StudyDate = dbVisitStudyList.Select(t => t.StudyDate).MaxBy(d => DateTime.Parse(d)) ?? ""
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});
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}
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else
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{
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var checkResult =
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String.Join(" | ", dbExceptExcel.Select(t => $"{_localizer["ConsistencyVerification_EdcL", t.StudyDate, t.Modality/*, _systemEmailConfig.SystemShortName*/]}")) + " | "
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+ String.Join(" | ", excelExceptDB.Select(t => $"{_localizer["ConsistencyVerification_IrcLi", t.StudyDate, t.Modality, _systemEmailConfig.SystemShortName]}"));
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//每个受试者每个访视加一条记录
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fullCheckResultList.Add(new FullCheckResult()
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{
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SubjectStatus = dbCurrentVisitFirst.SubjectStatus,
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CheckTime = DateTime.Now,
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SiteCode = dbCurrentVisitFirst.SiteCode,
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SubjectCode = dbCurrentVisitFirst.SubjectCode,
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VisitName = dbCurrentVisitFirst.VisitName,
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Modality = string.Join('、', dbVisitStudyList.Select(t => t.Modality)),
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StudyDate = dbVisitStudyList.Select(t => t.StudyDate).MaxBy(d => DateTime.Parse(d)) ?? "",
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CheckResult = checkResult
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});
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}
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//导到Excel 上传oss 回更记录状态
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var list = fullCheckResultList;
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var exportInfo = new ExcelExportInfo();
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exportInfo.List = ExportExcelConverterDate.ConvertToClientTimeInObject(list, _userInfo.TimeZoneId);
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exportInfo.CurrentTime = ExportExcelConverterDate.DateTimeInternationalToString(DateTime.Now, _userInfo.TimeZoneId);
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var fileStreamResult = (FileStreamResult)await ExcelExportHelper.DataExportAsync(StaticData.Export.TrialConsistentFUllCheckList_Export, exportInfo, exportInfo.TrialCode, _commonDocumentRepository, _hostEnvironment, _dictionaryService, typeof(FullCheckResult));
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var ossRelativePath = await _oSSService.UploadToOSSAsync(fileStreamResult.FileStream, $"{trialId.ToString()}/InspectionUpload/DataReconciliation", "DataReconciliation");
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await _inspectionFileRepository.BatchUpdateNoTrackingAsync(t => t.Id == inspectionFileId, u => new InspectionFile() { CheckState = EDCCheckState.Success, ResultPath = ossRelativePath });
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}
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}
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await _subjectVisitRepository.SaveChangesAsync();
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}
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}
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}
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Reference in New Issue
Block a user