488 lines
23 KiB
C#
488 lines
23 KiB
C#
using IRaCIS.Core.Application.Helper;
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using IRaCIS.Core.Application.Service.Reading.Dto;
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using IRaCIS.Core.Domain.Models;
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using IRaCIS.Core.Domain.Share;
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using IRaCIS.Core.Infra.EFCore.Common;
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using MassTransit;
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using Microsoft.AspNetCore.Http;
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using Microsoft.Extensions.Logging;
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using MiniExcelLibs;
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using System.Data;
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using System.IO;
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using System.Text;
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namespace IRaCIS.Core.Application.Service.ReadingCalculate
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{
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public class GeneralCalculateService(IRepository<ReadingTableQuestionAnswer> _readingTableQuestionAnswerRepository,
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IRepository<VisitTask> _visitTaskRepository,
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IRepository<ReadingQuestionCriterionTrial> _readingQuestionCriterionTrialRepository,
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ILogger<GeneralCalculateService> _logger,
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IRepository<ReadingTableQuestionTrial> _readingTableQuestionTrialRepository,
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IRepository<ReadingTableAnswerRowInfo> _readingTableAnswerRowInfoRepository,
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IRepository<ReadingQuestionTrial> _readingQuestionTrialRepository,
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IRepository<SubjectVisit> _subjectVisitRepository,
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IRepository<TumorAssessment_RECIST1Point1> _tumorAssessmentRepository,
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IRepository<ReadingTaskQuestionAnswer> _readingTaskQuestionAnswerRepository,
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IRepository<InspectionFile> _inspectionFileRepository,
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IOSSService oSSService, IMapper _mapper, IUserInfo _userInfo, IStringLocalizer _localizer) : BaseService, IGeneralCalculateService
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{
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/// <summary>
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/// 从上传文件中获取Datatable
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/// </summary>
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/// <returns></returns>
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public async Task<FileToDataTableDto> GetDataTableFromUpload(IFormFile file,string pathCode,Guid trialId)
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{
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FileToDataTableDto result=new FileToDataTableDto ();
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result.DataTable = new DataTable();
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var fileFolder = "Upload\\";
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if (!Directory.Exists(fileFolder))
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{
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Directory.CreateDirectory(fileFolder);
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}
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var fileName = DateTime.Now.ToString("yyyyMMddHHmmss") +
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Path.GetExtension(file.FileName);
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var filePath = Path.Combine(fileFolder, fileName);
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var fileStream = new MemoryStream();
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try
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{
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using (var stream = new FileStream(filePath, FileMode.Create))
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{
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file.CopyTo(stream);
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await stream.CopyToAsync(fileStream);
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result.SheetNames= stream.GetSheetNames();
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stream.Position = 0;
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result.DataTable = stream.QueryAsDataTable(useHeaderRow: false);
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}
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}
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catch (Exception)
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{
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File.Delete(filePath);
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}
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try
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{
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var ossRelativePath = await oSSService.UploadToOSSAsync(fileStream, "InspectionUpload/"+ pathCode, file.FileName);
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await _inspectionFileRepository.AddAsync(new InspectionFile() { FileName = file.FileName, RelativePath = ossRelativePath, TrialId = trialId });
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}
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catch (Exception)
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{
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}
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File.Delete(filePath);
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// 创建一个要删除的行集合
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var rowsToRemove = new System.Collections.Generic.List<DataRow>();
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// 遍历DataTable的每一行
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foreach (DataRow row in result.DataTable.Rows)
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{
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bool allEmpty = true;
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// 遍历每一列，检查值
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foreach (var item in row.ItemArray)
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{
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if (item!=null&&!item.ToString().IsNullOrEmpty())
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{
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allEmpty = false;
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break; // 只要有一个不为空，跳出循环
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}
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}
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// 如果所有列都是空字符串，则添加到待删除的行集合中
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if (allEmpty)
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{
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rowsToRemove.Add(row);
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}
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}
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// 移除标记为待删除的行
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foreach (var row in rowsToRemove)
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{
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result.DataTable.Rows.Remove(row);
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}
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return result;
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}
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/// <summary>
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/// 添加计算错误日志
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/// </summary>
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/// <param name="inDto"></param>
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/// <param name="lesionName"></param>
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/// <param name="lesionType"></param>
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/// <returns></returns>
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public async Task LogRecord(ReadingCalculateDto inDto, string lesionName, LesionType lesionType)
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{
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// 这里是记录日志 不需要国际化
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var criterionInfo = await _readingQuestionCriterionTrialRepository.Where(x => x.Id == inDto.TrialReadingCriterionId).Include(x => x.Trial).FirstNotNullAsync();
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var taskInfo = await _visitTaskRepository.Where(x => x.Id == inDto.VisitTaskId).Include(x => x.Subject).Include(x => x.DoctorUser).ThenInclude(t => t.IdentityUser).FirstNotNullAsync();
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//错误级别日志：项目、标准、受试者、阅片人、任务。输出其它既往新病灶数据：
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StringBuilder builder = new StringBuilder();
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builder.AppendLine($"");
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builder.AppendLine($"【项目】:【{criterionInfo.Trial.TrialCode}】");
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builder.AppendLine($"【项目Id】:【{criterionInfo.TrialId}】");
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builder.AppendLine($"【标准】:【{criterionInfo.CriterionName}】");
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builder.AppendLine($"【标准Id】:【{criterionInfo.Id}】");
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builder.AppendLine($"【受试者】:【{taskInfo.Subject.ShortName}】");
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builder.AppendLine($"【受试者Id】:【{taskInfo.Subject.Id}】");
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builder.AppendLine($"【阅片人】:【{taskInfo.DoctorUser.IdentityUser.FullName}】");
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builder.AppendLine($"【阅片人Id】:【{taskInfo.DoctorUser.Id}】");
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builder.AppendLine($"【任务】:【{taskInfo.TaskBlindName}】");
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builder.AppendLine($"【任务Id】:【{taskInfo.Id}】");
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builder.AppendLine($"【病灶类型】:【{lesionName}】");
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var lesionInfo = inDto.QuestionInfo.Where(x => x.LesionType == lesionType).FirstOrDefault();
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if (lesionInfo != null)
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{
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lesionInfo.TableRowInfoList.OrderBy(x => x.RowIndex).ForEach(x =>
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{
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builder.AppendLine(@$"【病灶编号】:【{x.RowIndex.ToString()}】,
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【病灶长径】:【{x.TableQuestionList.Where(y => y.QuestionMark == QuestionMark.MajorAxis).Select(y => y.Answer).FirstIsNullReturnEmpty()}】,
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【病灶短径】:【{x.TableQuestionList.Where(y => y.QuestionMark == QuestionMark.ShortAxis).Select(y => y.Answer).FirstIsNullReturnEmpty()}】,
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【病灶状态】:【{x.TableQuestionList.Where(y => y.QuestionMark == QuestionMark.State).Select(y => y.Answer).FirstIsNullReturnEmpty()}】");
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});
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}
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_logger.LogError(builder.ToString());
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}
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/// <summary>
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/// 获取ReadingCalculateDto
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/// </summary>
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/// <param name="visitTaskId"></param>
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/// <returns></returns>
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public async Task<ReadingCalculateDto> GetReadingCalculateDto(Guid visitTaskId)
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{
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var visitTask = await _visitTaskRepository.Where(x => x.Id == visitTaskId).FirstNotNullAsync();
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var criterionInfo = await _readingQuestionCriterionTrialRepository.Where(x => x.Id == visitTask.TrialReadingCriterionId).FirstNotNullAsync();
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var subjectVisit = await _subjectVisitRepository.Where(x => x.Id == (visitTask.SourceSubjectVisitId ?? default(Guid))).FirstOrDefaultAsync();
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var baseLineVisitId = await _subjectVisitRepository.Where(x => x.SubjectId == visitTask.SubjectId && x.IsBaseLine).Select(x => x.Id).FirstOrDefaultAsync();
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var rowInfoList = await _readingTableAnswerRowInfoRepository.Where(x => x.VisitTaskId == visitTaskId).ToListAsync();
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var baseLinetaskId = await _visitTaskRepository.Where(x => x.SourceSubjectVisitId == baseLineVisitId && x.TaskState == TaskState.Effect
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&& x.TrialReadingCriterionId == visitTask.TrialReadingCriterionId
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&& x.ArmEnum == visitTask.ArmEnum).Select(x => x.Id).FirstOrDefaultAsync();
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List<QuestionInfo> questionInfos = await _readingQuestionTrialRepository.Where(x => x.ReadingQuestionCriterionTrialId == visitTask.TrialReadingCriterionId).Select(x => new QuestionInfo()
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{
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LesionType = x.LesionType,
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QuestionId = x.Id,
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QuesionName = x.QuestionName.LanguageName(x.QuestionEnName, _userInfo.IsEn_Us),
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OrderMark = x.OrderMark,
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QuestionType = x.QuestionType,
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ValueType = x.ValueType,
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}).ToListAsync();
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var questionAnswers = await _readingTaskQuestionAnswerRepository.Where(x => x.VisitTaskId == visitTaskId).Select(x => new
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{
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x.ReadingQuestionTrialId,
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x.Answer
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}).ToListAsync();
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var tableQuestion = await _readingTableQuestionAnswerRepository.Where(x => x.VisitTaskId == visitTaskId).Include(x => x.ReadingTableQuestionTrial).Select(x => new TableQuestionInfo()
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{
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Answer = x.Answer,
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AnswerId = x.Id,
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QuestionMark = x.ReadingTableQuestionTrial.QuestionMark,
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TableQuestionId = x.TableQuestionId,
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QuestionId = x.QuestionId,
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QuestionType = x.ReadingQuestionTrial.QuestionType,
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RowIndex = x.RowIndex,
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RowId = x.RowId,
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}).ToListAsync();
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foreach (var item in questionInfos)
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{
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item.Answer = questionAnswers.Where(y => y.ReadingQuestionTrialId == item.QuestionId).Select(x => x.Answer).FirstOrDefault() ?? string.Empty;
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var thisItemRowInfo = rowInfoList.Where(x => x.QuestionId == item.QuestionId).ToList();
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var thisItemTableQuestions = tableQuestion.Where(x => x.QuestionId == item.QuestionId).ToList();
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item.TableRowInfoList = thisItemRowInfo.Select(x => new TableRowInfo()
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{
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RowId = x.Id,
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RowIndex = x.RowIndex,
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MeasureData = x.MeasureData,
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OtherMeasureData = x.OtherMeasureData,
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FristAddTaskNum = x.FristAddTaskNum,
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TableQuestionList = tableQuestion.Where(y => y.QuestionId == item.QuestionId && y.RowId == x.Id).ToList(),
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}).ToList();
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}
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ReadingCalculateDto readingData = new ReadingCalculateDto()
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{
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SubjectId = visitTask.SubjectId,
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TaskBlindName = visitTask.TaskBlindName,
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IsConvertedTask = await _visitTaskRepository.Where(x => x.Id == visitTaskId).Select(x => x.IsConvertedTask).FirstOrDefaultAsync(),
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BeforeConvertedTaskId = visitTask.BeforeConvertedTaskId,
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VisitTaskId = visitTaskId,
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SubjectVisitId = visitTask.SourceSubjectVisitId!.Value,
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QuestionInfo = questionInfos,
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CriterionId = visitTask.TrialReadingCriterionId,
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TrialId = visitTask.TrialId,
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IsAnalysisCreate = visitTask.IsAnalysisCreate,
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IsSelfAnalysis = visitTask.IsSelfAnalysis,
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IsBaseLine = subjectVisit!.IsBaseLine,
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DoctorUserId = visitTask.DoctorUserId,
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TrialReadingCriterionId = visitTask.TrialReadingCriterionId,
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BaseLineTaskId = baseLinetaskId,
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ArmEnum = visitTask.ArmEnum,
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VisitName = subjectVisit.VisitName,
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BlindName = subjectVisit.BlindName,
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VisitTaskNum = visitTask.VisitTaskNum,
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DigitPlaces = criterionInfo.DigitPlaces ?? 2,
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};
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return readingData;
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}
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/// <summary>
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/// 添加转化任务病灶信息
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/// </summary>
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/// <param name="visitTaskId"></param>
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/// <param name="beforeConvertedTaskId"></param>
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/// <returns></returns>
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public async Task AddConvertedTaskFocus(Guid visitTaskId, Guid beforeConvertedTaskId)
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{
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var originalTask = await _visitTaskRepository.Where(x => x.Id == visitTaskId).Include(x => x.TrialReadingCriterion).FirstNotNullAsync();
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var taskAnswer = await _readingTaskQuestionAnswerRepository.Where(x => x.VisitTaskId == beforeConvertedTaskId && x.ReadingQuestionTrial.QuestionType != QuestionType.AdjustReason && x.ReadingQuestionTrial.Type != "calculation").IgnoreAutoIncludes().AsNoTracking().ToListAsync();
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taskAnswer.ForEach(x =>
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{
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x.VisitTaskId = visitTaskId;
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x.Id = NewId.NextGuid();
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});
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var tableRowAnswers = await _readingTableAnswerRowInfoRepository.Where(x => x.VisitTaskId == beforeConvertedTaskId).AsNoTracking().ProjectTo<CopyTableAnswerRowInfo>(_mapper.ConfigurationProvider).IgnoreAutoIncludes().ToListAsync();
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tableRowAnswers.ForEach(x =>
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{
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x.VisitTaskId = visitTaskId;
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x.IsCurrentTaskAdd = false;
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x.FristAddTaskId = x.FristAddTaskId == beforeConvertedTaskId ? visitTaskId : x.FristAddTaskId;
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x.Id = NewId.NextGuid();
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});
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tableRowAnswers.ForEach(x =>
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{
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x.SplitRowId = tableRowAnswers.Where(y => y.OriginalId == x.SplitRowId).Select(y => y.Id).FirstOrDefault();
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x.MergeRowId = tableRowAnswers.Where(y => y.OriginalId == x.MergeRowId).Select(y => y.Id).FirstOrDefault();
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});
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var tableAnswer = await _readingTableQuestionAnswerRepository.Where(x => x.VisitTaskId == beforeConvertedTaskId).IgnoreAutoIncludes().AsNoTracking().ToListAsync();
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tableAnswer.ForEach(x =>
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{
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x.Id = NewId.NextGuid();
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x.VisitTaskId = visitTaskId;
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x.RowId = tableRowAnswers.Where(y => y.OriginalId == x.RowId).Select(x => x.Id).FirstOrDefault();
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});
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var addrowInfo = _mapper.Map<List<ReadingTableAnswerRowInfo>>(tableRowAnswers);
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switch (originalTask.TrialReadingCriterion.CriterionType)
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{
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case CriterionType.IRECIST1Point1:
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//非靶病灶全部数据复制，不可更改。支持如果状态为:显著增大需要自动改为: 显著增大(iUPD)
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var stateQuestionId = await _readingTableQuestionTrialRepository.Where(x => x.TrialCriterionId == originalTask.TrialReadingCriterionId
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&& x.ReadingQuestionTrial.LesionType == LesionType.NonTargetLesions && x.QuestionMark == QuestionMark.State).Select(x => x.Id).FirstOrDefaultAsync();
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tableAnswer.ForEach(x =>
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{
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if (x.TableQuestionId == stateQuestionId && x.Answer.EqEnum(NoTargetState.Increase))
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{
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x.Answer = NoTargetState.IUPD.GetEnumInt();
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}
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});
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// 新转换为其它既往新病灶: 状态为消失、疑似、无法评估的新病灶自动转换为:其它既往新病灶，且不可以编辑
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// 找到新病灶问题
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var newLesionQuestion = await _readingQuestionTrialRepository.Where(x => x.ReadingQuestionCriterionTrialId == originalTask.TrialReadingCriterionId && x.LesionType == LesionType.NewLesions).FirstOrDefaultAsync();
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// 找到其他既往新病灶
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var otherLesionQuestion = await _readingQuestionTrialRepository.Where(x => x.ReadingQuestionCriterionTrialId == originalTask.TrialReadingCriterionId && x.LesionType == LesionType.OtherPreviousNewLesion).FirstOrDefaultAsync();
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if (newLesionQuestion != null && otherLesionQuestion != null)
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{
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// 找到表格问题
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var newLesionTableQuestionList = await _readingTableQuestionTrialRepository.Where(x => x.ReadingQuestionId == newLesionQuestion.Id).ToListAsync();
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// 找到表格问题
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var otherLesionTableQuestionList = await _readingTableQuestionTrialRepository.Where(x => x.ReadingQuestionId == otherLesionQuestion.Id).ToListAsync();
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// 找到病灶状态
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var newstateQuestionId = newLesionTableQuestionList.Where(x => x.QuestionMark == QuestionMark.State).Select(x => x.Id).FirstOrDefault();
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var stateAnswers = new List<string>() {
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NewLesionState.Loss.GetEnumInt(),
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NewLesionState.Suspected.GetEnumInt(),
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NewLesionState.UnableEvaluate.GetEnumInt()
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};
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var needRowIds = tableAnswer.Where(x => x.TableQuestionId == newstateQuestionId && stateAnswers.Contains(x.Answer)).Select(x => x.RowId).Distinct().ToList();
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var index = 0;
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addrowInfo.ForEach(x =>
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{
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if (needRowIds.Contains(x.Id))
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{
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index++;
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x.RowIndex = index;
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x.RowMark = otherLesionQuestion.OrderMark + x.RowIndex.GetLesionMark();
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var fristAddTaskId = x.FristAddTaskId.Clone();
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x.FromMark = fristAddTaskId == beforeConvertedTaskId ? string.Empty : x.RowMark;
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x.FristAddTaskId = fristAddTaskId == beforeConvertedTaskId ? visitTaskId : fristAddTaskId;
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x.QuestionId = otherLesionQuestion.Id;
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x.OrderMark = otherLesionQuestion.OrderMark;
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x.ReportMark = x.RowMark;
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}
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});
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tableAnswer.ForEach(x =>
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{
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if (needRowIds.Contains(x.RowId))
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{
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var row = addrowInfo.Where(y => y.Id == x.RowId).FirstOrDefault();
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if (row != null)
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{
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x.RowIndex = row.RowIndex;
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}
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x.QuestionId = otherLesionQuestion.Id;
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var newLesionTableQuestion = newLesionTableQuestionList.Where(y => y.Id == x.TableQuestionId).FirstOrDefault();
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if (newLesionTableQuestion != null)
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{
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x.TableQuestionId = otherLesionTableQuestionList.Where(y => y.QuestionMark == newLesionTableQuestion.QuestionMark).Select(x => x.Id).FirstOrDefault();
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}
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}
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});
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}
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break;
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}
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await _readingTaskQuestionAnswerRepository.AddRangeAsync(taskAnswer);
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await _readingTableAnswerRowInfoRepository.AddRangeAsync(addrowInfo);
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await _readingTableQuestionAnswerRepository.AddRangeAsync(tableAnswer);
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await _readingTableQuestionAnswerRepository.SaveChangesAsync();
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}
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/// <summary>
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/// 获取阅片报告任务List
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/// </summary>
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/// <param name="visitTaskId"></param>
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/// <returns></returns>
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public async Task<List<VisitTaskInfo>> GetReadingReportTaskList(Guid visitTaskId)
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{
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var visitTaskInfo = await _visitTaskRepository.Where(x => x.Id == visitTaskId).Include(x => x.TrialReadingCriterion).FirstNotNullAsync();
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var isAdditionalQuestionId = await _readingQuestionTrialRepository.Where(x => x.ReadingQuestionCriterionTrialId == visitTaskInfo.TrialReadingCriterionId && x.IsAdditional).IgnoreQueryFilters().Select(x => x.Id).ToListAsync();
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var taskquery = _visitTaskRepository
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.Where(x => (x.SubjectId == visitTaskInfo.SubjectId
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&& (x.TaskState == TaskState.Effect || x.TaskState == TaskState.Freeze)
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&& x.IsAnalysisCreate == visitTaskInfo.IsAnalysisCreate
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&& x.DoctorUserId == visitTaskInfo.DoctorUserId
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&& x.IsSelfAnalysis == visitTaskInfo.IsSelfAnalysis
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&& x.VisitTaskNum <= visitTaskInfo.VisitTaskNum
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&& x.ArmEnum == visitTaskInfo.ArmEnum
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&& x.TrialReadingCriterionId == visitTaskInfo.TrialReadingCriterionId
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&& x.ReadingCategory == ReadingCategory.Visit && x.ReadingTaskState == ReadingTaskState.HaveSigned) || x.Id == visitTaskId
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);
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if (visitTaskInfo.ReadingTaskState == ReadingTaskState.HaveSigned)
|
|
{
|
|
taskquery = _visitTaskRepository.Where(x => visitTaskInfo.ReportRelatedTaskIdList.Contains(x.Id) || x.Id == visitTaskInfo.Id);
|
|
}
|
|
if (visitTaskInfo.TrialReadingCriterion.IsReadingTaskViewInOrder != ReadingOrder.InOrder)
|
|
{
|
|
taskquery = _visitTaskRepository.Where(x => x.Id == visitTaskInfo.Id);
|
|
}
|
|
|
|
|
|
|
|
var taskInfoList = await taskquery.OrderBy(x => x.VisitTaskNum).Select(x => new VisitTaskInfo()
|
|
{
|
|
BlindName = x.TaskBlindName,
|
|
IsBaseLine = x.SourceSubjectVisit.IsBaseLine,
|
|
VisitTaskId = x.Id,
|
|
TaskState = x.TaskState,
|
|
TaskName = x.TaskName,
|
|
LatestScanDate = x.SourceSubjectVisit != null ? x.SourceSubjectVisit.LatestScanDate : null,
|
|
VisitTaskNum = x.VisitTaskNum,
|
|
IsConvertedTask = x.IsConvertedTask,
|
|
BeforeConvertedTaskId = x.BeforeConvertedTaskId,
|
|
//CrterionDictionaryGroup = x.CrterionDictionaryGroup,
|
|
IsCurrentTask = x.Id == visitTaskId,
|
|
|
|
}).OrderBy(x => x.VisitTaskNum).ThenByDescending(x => x.TaskState).ToListAsync();
|
|
|
|
|
|
taskInfoList.ForEach(x =>
|
|
{
|
|
x.CrterionDictionaryGroup = ReadingCommon.GetCrterionDictionaryGroup(x.IsConvertedTask);
|
|
});
|
|
|
|
var taskIds = taskInfoList.Select(x => x.VisitTaskId).ToList();
|
|
|
|
var isHaveAdditionalTaskIds = await _readingTaskQuestionAnswerRepository.Where(x => taskIds.Contains(x.VisitTaskId) && isAdditionalQuestionId.Contains(x.ReadingQuestionTrialId)).Select(x => x.VisitTaskId).Distinct().ToListAsync();
|
|
|
|
taskInfoList.ForEach(x =>
|
|
{
|
|
x.IsHaveAdditionalQuestion = isHaveAdditionalTaskIds.Contains(x.VisitTaskId);
|
|
});
|
|
return taskInfoList;
|
|
}
|
|
}
|
|
}
|