using IRaCIS.Core.Domain.Share; using Microsoft.AspNetCore.Mvc; using IRaCIS.Core.Application.Service.Reading.Dto; using IRaCIS.Core.Infra.EFCore.Common; using IRaCIS.Core.Application.Contracts; using IRaCIS.Core.Application.Service.Inspection.DTO; using Panda.DynamicWebApi.Attributes; using Microsoft.Extensions.DependencyInjection; using System.Linq.Expressions; using IRaCIS.Core.Infrastructure; namespace IRaCIS.Application.Services { /// /// 阅片临床数据 /// [ApiExplorerSettings(GroupName = "Reading")] public class ReadingClinicalDataService : BaseService, IReadingClinicalDataService { private readonly IRepository _readingClinicalDataRepository; private readonly IRepository _clinicalDataTrialSetRepository; private readonly IRepository _visitTaskRepository; private readonly IRepository _previousPDFRepository; private readonly IRepository _subjectVisitRepository; private readonly IRepository _previousHistoryRepository; private readonly IRepository _previousOtherRepository; private readonly IRepository _previousSurgeryRepository; private readonly IRepository _readingQuestionCriterionTrialRepository; private readonly IServiceProvider iServiceProvider; private readonly IRepository _subjectRepository; private readonly IRepository _readModuleRepository; private readonly IRepository _readingClinicalDataPDFRepository; public ReadingClinicalDataService(IRepository readingClinicalDataRepository, IRepository clinicalDataTrialSetRepository, IRepository previousPDFRepository, IRepository subjectVisitRepository, IRepository previousHistoryRepository, IRepository previousOtherRepository, IRepository previousSurgeryRepository, IRepository readingQuestionCriterionTrialRepository, IServiceProvider IServiceProvider, IRepository subjectRepository, IRepository readModuleRepository, IRepository readingClinicalDataPDFRepository, IRepository visitTaskRepository) { this._readingClinicalDataRepository = readingClinicalDataRepository; this._clinicalDataTrialSetRepository = clinicalDataTrialSetRepository; this._previousPDFRepository = previousPDFRepository; this._subjectVisitRepository = subjectVisitRepository; this._previousHistoryRepository = previousHistoryRepository; this._previousOtherRepository = previousOtherRepository; this._previousSurgeryRepository = previousSurgeryRepository; this._readingQuestionCriterionTrialRepository = readingQuestionCriterionTrialRepository; this.iServiceProvider = IServiceProvider; this._subjectRepository = subjectRepository; this._readModuleRepository = readModuleRepository; this._readingClinicalDataPDFRepository = readingClinicalDataPDFRepository; this._visitTaskRepository = visitTaskRepository; } #region 临床数据基本增删改 /// /// 新增或者修改 /// /// /// [HttpPost] public async Task AddOrUpdateReadingClinicalData(AddOrUpdateReadingClinicalDataDto indto) { var existsQuery = _readingClinicalDataRepository .WhereIf(indto.Id != null, x => x.Id != indto.Id) .Where(x => x.ClinicalDataTrialSetId == indto.ClinicalDataTrialSetId && x.ReadingId == indto.ReadingId); if (await existsQuery.AnyAsync()) { return ResponseOutput.NotOk("存在同类型的临床数据"); } var clinicalDataTrialSet = (await _clinicalDataTrialSetRepository.Where(x => x.Id == indto.ClinicalDataTrialSetId).FirstOrDefaultAsync()).IfNullThrowException(); //subject 或者检查批次级别的 都是在检查批次传 indto.IsVisit = clinicalDataTrialSet.ClinicalDataLevel == ClinicalLevel.Subject || clinicalDataTrialSet.ClinicalDataLevel == ClinicalLevel.SubjectVisit; if (indto.Id == null) { var entity = _mapper.Map(indto); entity.ReadingClinicalDataPDFList = indto.AddFileList.Select(x => new ReadingClinicalDataPDF() { FileName = x.FileName, Path = x.Path, }).ToList(); entity.ReadingClinicalDataState = ReadingClinicalDataStatus.HaveUploaded; entity.IsBlind = null; entity.IsComplete = null; entity.FileCount = entity.ReadingClinicalDataPDFList.Count(); await _readingClinicalDataRepository.AddAsync(entity, true); var success = await _readingClinicalDataRepository.SaveChangesAsync(); return ResponseOutput.Ok(entity.Id); } else { var entity = (await _readingClinicalDataRepository.Where(t => t.Id == indto.Id, true).FirstOrDefaultAsync()).IfNullThrowException(); await _readingClinicalDataPDFRepository.BatchDeleteNoTrackingAsync(x => indto.DeleteFileIds.Contains(x.Id)); var addFileList = indto.AddFileList.Select(x => new ReadingClinicalDataPDF() { FileName = x.FileName, Path = x.Path, ReadingClinicalDataId = entity.Id, }).ToList(); _mapper.Map(indto, entity); //上传 或者删除了文件 核查状态需要重新确认 if (indto.AddFileList.Count > 0 || indto.AddFileList.Count > 0) { entity.IsComplete = null; entity.IsBlind = null; } await _readingClinicalDataPDFRepository.AddRangeAsync(addFileList); await _readingClinicalDataPDFRepository.SaveChangesAsync(); var fileCount = await _readingClinicalDataPDFRepository.Where(t => t.ReadingClinicalDataId == indto.Id).CountAsync(); entity.ReadingClinicalDataState = ReadingClinicalDataStatus.HaveUploaded; entity.FileCount = fileCount; var success = await _readingClinicalDataRepository.SaveChangesAsync(); return ResponseOutput.Ok(entity.Id); } } /// /// 删除 /// /// /// [HttpDelete("{id:guid}")] public async Task DeleteReadingClinicalData(Guid id) { await _readingClinicalDataRepository.DeleteFromQueryAsync(x => x.Id == id, true); await _readingClinicalDataPDFRepository.DeleteFromQueryAsync(x => x.ReadingClinicalDataId == id, true); return ResponseOutput.Result(true); } #endregion #region 临床数据IC 相关 /// /// 获取IC上传的文件 /// /// /// [HttpPost] public async Task> GetCRCClinicalData(GetCRCClinicalDataInDto inDto) { if (_userInfo.UserTypeEnumInt == (int)UserTypeEnum.ClinicalResearchCoordinator) { await this.AddCRCClinicalData(inDto); } List cRCClinicalDataList = await _readingClinicalDataRepository.Where(x => x.ReadingId == inDto.SubjectVisitId) .WhereIf(inDto.IsBaseline, x => x.ClinicalDataTrialSet.ClinicalDataLevel == ClinicalLevel.Subject || x.ClinicalDataTrialSet.ClinicalDataLevel == ClinicalLevel.SubjectVisit) .WhereIf(!inDto.IsBaseline, x => x.ClinicalDataTrialSet.ClinicalDataLevel == ClinicalLevel.SubjectVisit) .Where(x => x.ClinicalDataTrialSet.TrialId == inDto.TrialId && x.ClinicalDataTrialSet.UploadRole == UploadRole.CRC) .Select(x => new GetCRCClinicalDataOutDto() { Id = x.Id, ClinicalDataSetName = x.ClinicalDataTrialSet.ClinicalDataSetName, ClinicalUploadType = x.ClinicalDataTrialSet.ClinicalUploadType, ClinicalDataTrialSetId = x.ClinicalDataTrialSet.Id, FileName = x.ClinicalDataTrialSet.FileName, UploadRole = x.ClinicalDataTrialSet.UploadRole, Path = x.ClinicalDataTrialSet.Path, IsBlind = x.IsBlind, IsComplete = x.IsComplete, PDFFileList = x.ReadingClinicalDataPDFList.Select(y => new GetFileDto() { Id = y.Id, FileName = y.FileName, Path = y.Path, CreateTime = y.CreateTime, }).ToList() }).ToListAsync(); List clinicalData = (await this.GetReadingClinicalDataList(new GetReadingClinicalDataListIndto() { SubjectId = inDto.SubjectId, ReadingId = inDto.SubjectVisitId, TrialId = inDto.TrialId, })).Item1; var previousHistoryList = await _previousHistoryRepository.Where(x => x.SubjectVisitId == inDto.SubjectVisitId).ProjectTo(_mapper.ConfigurationProvider).ToListAsync(); var previousOtherList = await _previousOtherRepository.Where(x => x.SubjectVisitId == inDto.SubjectVisitId).ProjectTo(_mapper.ConfigurationProvider).ToListAsync(); var previousSurgeryList = await _previousSurgeryRepository.Where(x => x.SubjectVisitId == inDto.SubjectVisitId).ProjectTo(_mapper.ConfigurationProvider).ToListAsync(); foreach (var item in cRCClinicalDataList) { //item.PDFFileList = clinicalData.Where(y => y.ClinicalDataTrialSetId == item.ClinicalDataTrialSetId).SelectMany(x => x.FileList).ToList(); item.ClinicalTableData = new ClinicalDataTable() { PreviousHistoryList = previousHistoryList.Where(x => x.ClinicalDataTrialSetId == item.ClinicalDataTrialSetId).ToList(), PreviousOtherList = previousOtherList.Where(x => x.ClinicalDataTrialSetId == item.ClinicalDataTrialSetId).ToList(), PreviousSurgeryList = previousSurgeryList.Where(x => x.ClinicalDataTrialSetId == item.ClinicalDataTrialSetId).ToList(), }; } return cRCClinicalDataList; } /// /// 添加IC数据类型 /// /// private async Task AddCRCClinicalData(GetCRCClinicalDataInDto inDto) { var cRCClinicalDataIds = await _clinicalDataTrialSetRepository.Where(x => x.TrialId == inDto.TrialId && x.UploadRole == UploadRole.CRC && x.IsConfirm) .WhereIf(inDto.IsBaseline, x => x.ClinicalDataLevel == ClinicalLevel.Subject || x.ClinicalDataLevel == ClinicalLevel.SubjectVisit) .WhereIf(!inDto.IsBaseline, x => x.ClinicalDataLevel == ClinicalLevel.SubjectVisit) .Select(x => x.Id).ToListAsync(); var needAddIds = cRCClinicalDataIds.Where(x => _readingClinicalDataRepository.Where(y => y.ReadingId == inDto.SubjectVisitId && x == y.ClinicalDataTrialSetId).Count() == 0).ToList(); List readingClinicals = needAddIds.Select(x => new ReadingClinicalData() { ClinicalDataTrialSetId = x, IsVisit = true, SubjectId = inDto.SubjectId, ReadingId = inDto.SubjectVisitId, TrialId = inDto.TrialId }).ToList(); await _readingClinicalDataRepository.AddRangeAsync(readingClinicals); await _readingClinicalDataRepository.SaveChangesAsync(); } #endregion #region 临床数据签名 和确认 /// /// 影像阅片临床数据签名 /// // [HttpPost] public async Task ReadClinicalDataSign(ReadingClinicalDataSignIndto inDto) { var data = await _readingClinicalDataRepository.FirstOrDefaultAsync(t => t.Id == inDto.ReadingClinicalDataId); if (data.ReadingClinicalDataState != ReadingClinicalDataStatus.HaveChecked) { throw new BusinessValidationFailedException("当前临床数据状态不是已核查状态,不允许签名!"); } data.IsSign = true; data.ReadingClinicalDataState = ReadingClinicalDataStatus.HaveSigned; //await _readingClinicalDataRepository.UpdatePartialFromQueryAsync(x => x.Id == inDto.ReadingClinicalDataId, x => new ReadingClinicalData() //{ // IsSign = true, // ReadingClinicalDataState = ReadingClinicalDataStatus.HaveSigned //}); var result = await _readingClinicalDataRepository.SaveChangesAsync(); var readingId = await _readingClinicalDataRepository.Where(x => x.Id == inDto.ReadingClinicalDataId).Select(x => x.ReadingId).FirstOrDefaultAsync(); await this.iServiceProvider.GetService().AddOncologyTask(readingId); await DealVisiTaskClinicalDataSignedAsync(data.TrialId, data.SubjectId, data.ReadingId, data.IsVisit, inDto.TrialReadingCriterionId); return ResponseOutput.Result(result); } //处理 任务 临床数据是否签名 private async Task DealVisiTaskClinicalDataSignedAsync(Guid trialId, Guid subjectId, Guid readingId, bool isVisit, Guid trialReadingCritrialId) { //获取确认的临床数据配置 var trialClinicalDataSetList = _clinicalDataTrialSetRepository.Where(t => t.TrialId == trialId && t.IsConfirm).Include(t => t.TrialClinicalDataSetCriteriaList).ToList(); //var criterionType = await _readingQuestionCriterionTrialRepository.Where(t => t.Id == trialReadingCritrialId).Select(t => t.CriterionType).FirstOrDefaultAsync(); // 获取确认的项目标准 废弃 签名的时候 传递标准Id //var confirmedCtritrialList = _repository.Where(t => t.TrialId == trialId && t.ReadingInfoSignTime != null).Select(t => new { t.Id, t.CriterionType }).ToList(); var needSignCount = 0; var haveSignedCount = _readingClinicalDataRepository.Where(t => t.TrialId == trialId && t.IsSign && t.ReadingClinicalDataState == ReadingClinicalDataStatus.HaveSigned && t.ReadingId == readingId && t.ClinicalDataTrialSet.UploadRole == UploadRole.PM).Count(); if (isVisit) { var isBaseLine = await _subjectVisitRepository.Where(t => t.Id == readingId).Select(t => t.IsBaseLine).FirstOrDefaultAsync(); //判断是否基线 if (isBaseLine) { //IC 的自动签名 不用管 只用处理PM 的就好 needSignCount = trialClinicalDataSetList.Where(t => t.TrialClinicalDataSetCriteriaList.Any(c => c.TrialReadingCriterionId == trialReadingCritrialId) && (t.ClinicalDataLevel == ClinicalLevel.Subject || t.ClinicalDataLevel == ClinicalLevel.SubjectVisit) && t.UploadRole == UploadRole.PM).Count(); } else { needSignCount = trialClinicalDataSetList.Where(t => t.TrialClinicalDataSetCriteriaList.Any(c => c.TrialReadingCriterionId == trialReadingCritrialId) && t.ClinicalDataLevel == ClinicalLevel.SubjectVisit && t.UploadRole == UploadRole.PM).Count(); } //可能仅仅IC 基线 没有PM if (needSignCount == haveSignedCount /*&& needSignCount != 0*/) { //将该标准 该subject 该检查批次 任务临床数据状态变更 await _visitTaskRepository.BatchUpdateNoTrackingAsync(t => t.TrialId == trialId && t.SubjectId == subjectId && t.TrialReadingCriterionId == trialReadingCritrialId && t.SourceSubjectVisitId == readingId, u => new VisitTask() { IsClinicalDataSign = true }); } } else { //判断是影像学 还是肿瘤学阅片 var readingSetType = await _readModuleRepository.Where(t => t.Id == readingId).Select(t => t.ReadingSetType).FirstOrDefaultAsync(); //影像学 if (readingSetType == ReadingSetType.ImageReading) { needSignCount = trialClinicalDataSetList.Where(t => t.TrialClinicalDataSetCriteriaList.Any(c => c.TrialReadingCriterionId == trialReadingCritrialId) && t.ClinicalDataLevel == ClinicalLevel.ImageRead).Count(); } //肿瘤学 else { needSignCount = trialClinicalDataSetList.Where(t => t.TrialClinicalDataSetCriteriaList.Any(c => c.TrialReadingCriterionId == trialReadingCritrialId) && t.ClinicalDataLevel == ClinicalLevel.OncologyRead).Count(); } //可能仅仅IC 基线 没有PM if (needSignCount == haveSignedCount /*&& needSignCount != 0*/) { //将该标准 该subject 该阅片期|肿瘤学 任务临床数据状态变更 await _visitTaskRepository.BatchUpdateNoTrackingAsync(t => t.TrialId == trialId && t.SubjectId == subjectId && t.TrialReadingCriterionId == trialReadingCritrialId && t.SouceReadModuleId == readingId, u => new VisitTask() { IsClinicalDataSign = true }); } } Expression> visitTaskLambda = x => x.TrialId == trialId && x.SubjectId == subjectId && x.TrialReadingCriterionId == trialReadingCritrialId; //维护 IsFrontTaskNeedSignButNotSign 在添加任务哪里用触发器也维护了 var visitTaskIdQueryable = _visitTaskRepository.Where(visitTaskLambda) //该Subject 该标准的任务 //小于自己任务号的任务 存在需要签名 但是没签名 .Where(t => t.Subject.SubjectVisitTaskList.AsQueryable().Where(visitTaskLambda).Any(c => c.IsNeedClinicalDataSign == true && c.IsClinicalDataSign == false && c.VisitTaskNum < t.VisitTaskNum) && t.IsFrontTaskNeedSignButNotSign == false ) .Select(t => t.Id); await _visitTaskRepository.BatchUpdateNoTrackingAsync(t => visitTaskIdQueryable.Contains(t.Id), u => new VisitTask() { IsFrontTaskNeedSignButNotSign = true }); var visitTaskIdQueryable2 = _visitTaskRepository.Where(visitTaskLambda) //该Subject 该标准的任务 //小于自己任务号的任务 存在需要签名 但是没签名 .Where(t => !t.Subject.SubjectVisitTaskList.AsQueryable().Where(visitTaskLambda).Any(c => c.IsNeedClinicalDataSign == true && c.IsClinicalDataSign == false && c.VisitTaskNum < t.VisitTaskNum) && t.IsFrontTaskNeedSignButNotSign == true ) .Select(t => t.Id); await _visitTaskRepository.BatchUpdateNoTrackingAsync(t => visitTaskIdQueryable2.Contains(t.Id), u => new VisitTask() { IsFrontTaskNeedSignButNotSign = false }); } [HttpPut] public async Task PMClinicalDataConfirm(PMClinicalDataConfirmCommand command) { await _readingClinicalDataRepository.UpdatePartialFromQueryAsync(t => t.Id == command.Id, u => new ReadingClinicalData() { IsBlind = command.IsBlind, IsComplete = command.IsComplete, ReadingClinicalDataState = ReadingClinicalDataStatus.HaveChecked }); await _readingClinicalDataRepository.SaveChangesAsync(); return ResponseOutput.Ok(); } #endregion #region 临床数据相关查询 /// /// 获取下拉菜单 /// /// /// [HttpPost] public async Task> GetTrialClinicalDataSelect(GetTrialClinicalDataSelectIndto inDto) { var userTypes = new List() { (int)UserTypeEnum.ProjectManager, (int)UserTypeEnum.SPM, (int)UserTypeEnum.CPM, (int)UserTypeEnum.IndependentReviewer, }; if (userTypes.Contains(_userInfo.UserTypeEnumInt)) { inDto.UploadRole = UploadRole.PM; } ReadModule readModule = null; if (inDto.IsVisit == false) { readModule = await _readModuleRepository.Where(x => x.Id == inDto.ReadingId).FirstOrDefaultAsync(); } Dictionary keyValuePairs = new Dictionary(); keyValuePairs.Add(ModuleTypeEnum.Global, ClinicalLevel.ImageRead); keyValuePairs.Add(ModuleTypeEnum.Oncology, ClinicalLevel.OncologyRead); var usedIdsQuery = _readingClinicalDataRepository.Where(x => x.ReadingId == inDto.ReadingId && x.Id != inDto.ReadingClinicalDataId).Select(x => x.ClinicalDataTrialSetId); List clinicalList = await _clinicalDataTrialSetRepository.Where(x => x.TrialId == inDto.TrialId && x.IsConfirm) .WhereIf(inDto.UploadRole != null, x => x.UploadRole == inDto.UploadRole) .Where(x => !usedIdsQuery.Contains(x.Id)) .WhereIf(inDto.IsVisit && inDto.IsBaseLine, x => x.ClinicalDataLevel == ClinicalLevel.Subject || x.ClinicalDataLevel == ClinicalLevel.SubjectVisit) .WhereIf(inDto.IsVisit && !inDto.IsBaseLine, x => x.ClinicalDataLevel == ClinicalLevel.SubjectVisit) .WhereIf(!inDto.IsVisit, x => x.ClinicalDataLevel == ClinicalLevel.ImageRead || x.ClinicalDataLevel == ClinicalLevel.OncologyRead) .WhereIf(readModule != null, x => x.ClinicalDataLevel == keyValuePairs[readModule.ModuleType]) .WhereIf(inDto.TrialReadingCriterionId!=null,x=>x.TrialClinicalDataSetCriteriaList.Any(y=>y.TrialReadingCriterionId== inDto.TrialReadingCriterionId)) //.WhereIf(criterion!=null,x=>x.CriterionEnumListStr.Contains($"|{(int)criterion.CriterionType}|")) .Select(x => new GetTrialClinicalDataSelectOutDto() { ClinicalDataLevel = x.ClinicalDataLevel, ClinicalDataSetName = x.ClinicalDataSetName, ClinicalUploadType = x.ClinicalUploadType, FileName = x.FileName, Path = x.Path, Id = x.Id, CriterionEnumList = x.CriterionEnumList, }).ToListAsync(); return clinicalList; } /// /// 获取检查批次 阅片或任务临床数据 /// /// /// [HttpPost] public async Task<(List, object)> GetReadingOrTaskClinicalDataList(GetReadingOrTaskClinicalDataListInDto inDto) { var readingNameOrTaskBlindName = string.Empty; if (inDto.ReadingId == null) { var visitTask = await _visitTaskRepository.FirstOrDefaultAsync(x => x.Id == inDto.VisitTaskId); inDto.ReadingId = visitTask.SouceReadModuleId ?? visitTask.SourceSubjectVisitId; readingNameOrTaskBlindName = visitTask.TaskBlindName; } if (readingNameOrTaskBlindName.IsNullOrEmpty()) { readingNameOrTaskBlindName = await _subjectVisitRepository.Where(x => x.Id == inDto.ReadingId).Select(x => x.VisitName).FirstOrDefaultAsync(); if (readingNameOrTaskBlindName.IsNullOrEmpty()) { readingNameOrTaskBlindName = await _readModuleRepository.Where(x => x.Id == inDto.ReadingId).Select(x => x.ModuleName).FirstOrDefaultAsync(); } } inDto.SelectIsSign = false; var result = await GetClinicalDataList(inDto); var readingIds = result.Select(x => x.ReadingId).ToList(); var previousHistoryList = await _previousHistoryRepository.Where(x => readingIds.Contains(x.SubjectVisitId)).ProjectTo(_mapper.ConfigurationProvider).ToListAsync(); var previousOtherList = await _previousOtherRepository.Where(x => readingIds.Contains(x.SubjectVisitId)).ProjectTo(_mapper.ConfigurationProvider).ToListAsync(); var previousSurgeryList = await _previousSurgeryRepository.Where(x => readingIds.Contains(x.SubjectVisitId)).ProjectTo(_mapper.ConfigurationProvider).ToListAsync(); foreach (var item in result) { item.ClinicalTableData = new ClinicalDataTable() { PreviousHistoryList = previousHistoryList.Where(x => x.ClinicalDataTrialSetId == item.ClinicalDataTrialSetId).ToList(), PreviousOtherList = previousOtherList.Where(x => x.ClinicalDataTrialSetId == item.ClinicalDataTrialSetId).ToList(), PreviousSurgeryList = previousSurgeryList.Where(x => x.ClinicalDataTrialSetId == item.ClinicalDataTrialSetId).ToList(), }; } Dictionary keys = new Dictionary() { {ClinicalLevel.SubjectVisit,0 }, {ClinicalLevel.ImageRead,2 }, {ClinicalLevel.OncologyRead,3 }, {ClinicalLevel.Subject,4 }, }; result = result.OrderBy(x => keys[x.ClinicalDataLevel]).ToList(); return (result, new { SubjectCode = await _subjectRepository.Where(x => x.Id == inDto.SubjectId).Select(x => x.Code).FirstOrDefaultAsync(), ReadingNameOrTaskBlindName = readingNameOrTaskBlindName, }); } /// /// 获取阅片临床数据列表 /// /// /// [HttpPost] public async Task<(List, object)> GetReadingClinicalDataList(GetReadingClinicalDataListIndto inDto) { var getTrialClinicalDataSelectIndto = new GetTrialClinicalDataSelectIndto() { ReadingId = inDto.ReadingId, TrialId = inDto.TrialId, IsBaseLine = inDto.IsBaseLine, SubjectId = inDto.SubjectId, IsVisit = inDto.IsVisit, TrialReadingCriterionId = inDto.TrialReadingCriterionId }; var clinicalDataList = await this.GetTrialClinicalDataSelect(getTrialClinicalDataSelectIndto); if (_userInfo.UserTypeEnumInt == (int)UserTypeEnum.ClinicalResearchCoordinator || _userInfo.UserTypeEnumInt == (int)UserTypeEnum.IQC) { inDto.UploadRole = UploadRole.CRC; } var isBaseLine = await _subjectVisitRepository.AnyAsync(x => x.Id == inDto.ReadingId && x.IsBaseLine); var result = await this.GetReadingClinicalList(inDto); var readingIds = result.Select(x => x.ReadingId).ToList(); var previousHistoryList = await _previousHistoryRepository.Where(x => readingIds.Contains(x.SubjectVisitId)).ProjectTo(_mapper.ConfigurationProvider).ToListAsync(); var previousOtherList = await _previousOtherRepository.Where(x => readingIds.Contains(x.SubjectVisitId)).ProjectTo(_mapper.ConfigurationProvider).ToListAsync(); var previousSurgeryList = await _previousSurgeryRepository.Where(x => readingIds.Contains(x.SubjectVisitId)).ProjectTo(_mapper.ConfigurationProvider).ToListAsync(); foreach (var item in result) { item.ClinicalTableData = new ClinicalDataTable() { PreviousHistoryList = previousHistoryList.Where(x => x.ClinicalDataTrialSetId == item.ClinicalDataTrialSetId).ToList(), PreviousOtherList = previousOtherList.Where(x => x.ClinicalDataTrialSetId == item.ClinicalDataTrialSetId).ToList(), PreviousSurgeryList = previousSurgeryList.Where(x => x.ClinicalDataTrialSetId == item.ClinicalDataTrialSetId).ToList(), }; } return (result, new { IsCanAddClinicalData = clinicalDataList.Count() > 0, }); } [NonDynamicMethod] public async Task> GetClinicalDataList(GetReadingOrTaskClinicalDataListInDto inDto) { if (inDto.ReadingId == null) { var visitTask = await _visitTaskRepository.FirstOrDefaultAsync(x => x.Id == inDto.VisitTaskId); inDto.ReadingId = visitTask.SouceReadModuleId ?? visitTask.SourceSubjectVisitId; } var resultQuery = _readingClinicalDataRepository.Where(x => x.SubjectId == inDto.SubjectId) .WhereIf(inDto.ReadingClinicalDataId != null, x => x.Id == inDto.ReadingClinicalDataId) .WhereIf(inDto.SelectIsSign, x => x.IsSign == true) .Where(x => x.ReadingId == inDto.ReadingId || (x.SubjectId == inDto.SubjectId && x.ClinicalDataTrialSet.ClinicalDataLevel == ClinicalLevel.Subject)) .Select(x => new GetReadingClinicalDataListOutDto() { ClinicalDataLevel = x.ClinicalDataTrialSet.ClinicalDataLevel, SubjectId = x.SubjectId, ReadingId = x.ReadingId, ClinicalDataSetName = x.ClinicalDataTrialSet.ClinicalDataSetName, ClinicalDataTrialSetId = x.ClinicalDataTrialSetId, IsSign = x.IsSign, ClinicalUploadType = x.ClinicalDataTrialSet.ClinicalUploadType, CriterionEnumList = x.ClinicalDataTrialSet.CriterionEnumList, TrialClinicalDataSetCriteriaList=x.ClinicalDataTrialSet.TrialClinicalDataSetCriteriaList, Id = x.Id, UploadRole = x.ClinicalDataTrialSet.UploadRole, IsCRCUpload = x.ClinicalDataTrialSet.UploadRole == UploadRole.CRC, FileList = x.ReadingClinicalDataPDFList.Select(y => new GetFileDto() { Id = y.Id, FileName = y.FileName, Path = y.Path, CreateTime = y.CreateTime, }).ToList() }); var result = await resultQuery.ToListAsync(); // 根据标准 if (inDto.VisitTaskId != null) { var visitTaskInfo = await _visitTaskRepository.FirstOrDefaultAsync(x => x.Id == inDto.VisitTaskId); result = result.Where(x => x.TrialClinicalDataSetCriteriaList.Any(z=>z.TrialReadingCriterionId==visitTaskInfo.TrialReadingCriterionId)).ToList(); } result = result.Where(x => !(x.ClinicalUploadType == ClinicalUploadType.PDF && x.FileList.Count() == 0)).ToList(); // 需要排除表格为空的数据 var readingIds = result.Select(x => x.ReadingId).ToList(); var tablecount = (await _previousHistoryRepository.Where(x => readingIds.Contains(x.SubjectVisitId)).CountAsync()) + (await _previousOtherRepository.Where(x => readingIds.Contains(x.SubjectVisitId)).CountAsync()) + (await _previousSurgeryRepository.Where(x => readingIds.Contains(x.SubjectVisitId)).CountAsync()); if (tablecount == 0) { result = result.Where(x => x.ClinicalUploadType != ClinicalUploadType.Table).ToList(); } return result; } /// /// 获取临床数据集合 /// /// [NonDynamicMethod] public async Task> GetReadingClinicalList(GetReadingClinicalDataListIndto inDto) { //var criterionType = await _readingQuestionCriterionTrialRepository.Where(x => x.Id == inDto.TrialReadingCriterionId).Select(x => x.CriterionType).FirstNotNullAsync(); var resultQuery = _readingClinicalDataRepository.Where(x => x.SubjectId == inDto.SubjectId) .Where(x => x.ReadingId == inDto.ReadingId || (x.SubjectId == inDto.SubjectId && x.ClinicalDataTrialSet.ClinicalDataLevel == ClinicalLevel.Subject)) //.WhereIf(inDto.UploadRole == UploadRole.IC, x => x.ClinicalDataTrialSet.UploadRole == UploadRole.IC) .Where(x => x.ClinicalDataTrialSet.TrialClinicalDataSetCriteriaList.Any(t=>t.TrialReadingCriterionId==inDto.TrialReadingCriterionId)) .Select(x => new GetReadingClinicalDataListOutDto() { ClinicalDataLevel = x.ClinicalDataTrialSet.ClinicalDataLevel, SubjectId = x.SubjectId, ReadingId = x.ReadingId, ClinicalDataSetName = x.ClinicalDataTrialSet.ClinicalDataSetName, ClinicalDataTrialSetId = x.ClinicalDataTrialSetId, IsSign = x.IsSign, ClinicalUploadType = x.ClinicalDataTrialSet.ClinicalUploadType, Id = x.Id, UploadRole = x.ClinicalDataTrialSet.UploadRole, IsCRCUpload = x.ClinicalDataTrialSet.UploadRole == UploadRole.CRC, IsBlind = x.IsBlind, IsComplete = x.IsComplete, FileCount = x.FileCount, ReadingClinicalDataState = x.ReadingClinicalDataState, FileList = x.ReadingClinicalDataPDFList.Select(y => new GetFileDto() { Id = y.Id, FileName = y.FileName, Path = y.Path, CreateTime = y.CreateTime, }).ToList() }); var result = await resultQuery.ToListAsync(); //result = result.Where(x => !(x.UploadRole == UploadRole.IC && x.ClinicalUploadType == ClinicalUploadType.PDF && x.FileList.Count() == 0)).ToList(); return result; } #endregion #region 阅片临床数据PDF /// /// 获取单个阅片临床数据的所有文件 /// /// /// [HttpPost] public async Task> GetReadingClinicalDataPDFList(GetReadingClinicalDataPDFListIndto inDto) { var result = await _readingClinicalDataPDFRepository.Where(x => x.ReadingClinicalDataId == inDto.ReadingClinicalDataId).ProjectTo(_mapper.ConfigurationProvider) .ToPagedListAsync(inDto.PageIndex, inDto.PageSize, inDto.SortField == null ? nameof(GetReadingClinicalDataPDFListOutDto.FileName) : inDto.SortField, inDto.Asc); return result; } /// /// 删除PDF单个文件 /// /// /// [HttpDelete("{id:guid}")] public async Task DeleteReadingClinicalDataPDF(Guid id) { var pdf = await _readingClinicalDataPDFRepository.FirstOrDefaultAsync(t => t.Id == id); await _readingClinicalDataPDFRepository.DeleteAsync(pdf, true); var fileCount = await _readingClinicalDataPDFRepository.Where(t => t.ReadingClinicalDataId == pdf.ReadingClinicalDataId).CountAsync(); await _readingClinicalDataRepository.UpdatePartialFromQueryAsync(pdf.ReadingClinicalDataId, c => new ReadingClinicalData() { FileCount = fileCount }, true); return ResponseOutput.Result(true); } #endregion ///// ///// 设置临床数据是否盲化 ///// ///// //[HttpPost] //public async Task SetReadingClinicalDataIsBlind(SetReadingClinicalDataIsBlind inDto) //{ // await _readingClinicalDataRepository.UpdatePartialFromQueryAsync(inDto.Id, x=>new ReadingClinicalData() { // IsBlind=inDto.IsBlind, // }); // return ResponseOutput.Ok(await _readingClinicalDataRepository.SaveChangesAsync()); //} } }