479 lines
22 KiB
C#
479 lines
22 KiB
C#
using IRaCIS.Application.Interfaces;
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using IRaCIS.Core.Infra.EFCore;
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using IRaCIS.Core.Domain.Share;
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using IRaCIS.Core.Application.Filter;
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using Microsoft.AspNetCore.Mvc;
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using IRaCIS.Core.Application.Service.WorkLoad.DTO;
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using Microsoft.AspNetCore.Authorization;
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using IRaCIS.Core.Application.Auth;
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using IRaCIS.Core.Application.Service.Reading.Dto;
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using IRaCIS.Core.Domain.Share.Reading;
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using MassTransit;
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using Panda.DynamicWebApi.Attributes;
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using IRaCIS.Core.Application.Contracts;
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using IRaCIS.Core.Infra.EFCore.Common;
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namespace IRaCIS.Application.Services
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{
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/// <summary>
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/// 生成的阅片模块(在大列表上展示的) 阅片期
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/// </summary>
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[ApiExplorerSettings(GroupName = "Reading")]
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public class ReadModuleService : BaseService
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{
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public IRepository<SubjectVisit> _subjectVisitRepository;
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private readonly IRepository<Subject> _subjectRepository;
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private readonly IRepository<VisitStage> _visitstageRepository;
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private readonly IRepository<User> _userRepository;
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private readonly IRepository<Trial> _trialRepository;
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private readonly IRepository<ClinicalDataTrialSet> _clinicalDataTrialSetRepository;
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private readonly IRepository<ReadModuleView> _readModuleViewRepository;
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private readonly IRepository<DicomInstance> _dicomInstanceRepository;
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private readonly IRepository<NoneDicomStudyFile> _noneDicomStudyFileRepository;
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private readonly IRepository<ReadingPeriodSet> _readingPeriodSetRepository;
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private readonly IRepository<ReadModule> _readModuleRepository;
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public ReadModuleService(IRepository<SubjectVisit> subjectVisitRepository,
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IRepository<Subject> subjectRepository,
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IRepository<VisitStage> visitstageRepository,
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IRepository<User> UserRepository,
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IRepository<Trial> trialRepository,
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IRepository<ClinicalDataTrialSet> clinicalDataTrialSetRepository,
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IRepository<ReadModuleView> readModuleViewRepository,
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IRepository<DicomInstance> dicomInstanceRepository,
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IRepository<NoneDicomStudyFile> noneDicomStudyFileRepository,
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IRepository<ReadingPeriodSet> readingPeriodSetRepository,
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IRepository<ReadModule> readModuleRepository
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)
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{
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this._subjectVisitRepository = subjectVisitRepository;
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this._subjectRepository = subjectRepository;
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this._visitstageRepository = visitstageRepository;
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this._userRepository = UserRepository;
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this._trialRepository = trialRepository;
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this._clinicalDataTrialSetRepository = clinicalDataTrialSetRepository;
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this._readModuleViewRepository = readModuleViewRepository;
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this._dicomInstanceRepository = dicomInstanceRepository;
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this._noneDicomStudyFileRepository = noneDicomStudyFileRepository;
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this._readingPeriodSetRepository = readingPeriodSetRepository;
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this._readModuleRepository = readModuleRepository;
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}
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/// <summary>
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/// 获取读片计划列表 byZhouhang
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/// </summary>
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/// <param name="dto"></param>
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/// <returns></returns>
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public async Task<(PageOutput<ReadPlanView>, object)> GetReadPlanList(GetReadModuleDto dto)
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{
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var subjectQuery = _subjectRepository
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.WhereIf(dto.TrialId != null, x => x.TrialId == dto.TrialId)
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.WhereIf(dto.SubjectId != null, x => x.Id == dto.SubjectId)
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.WhereIf(dto.TrialSiteCode != null, x => x.TrialSite.TrialSiteCode == dto.TrialSiteCode)
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.WhereIf(dto.SubjectCode != null, x => x.Code == dto.SubjectCode)
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.Select(x => new ReadPlanView
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{
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TrialSiteCode = x.TrialSite.TrialSiteCode,
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SiteCode = x.TrialSite.TrialSiteCode,
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SiteId = x.SiteId,
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SubjectCode = x.Code,
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SubjectId = x.Id,
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//Data = x.SubjectVisitList.OrderByDescending(y => y.VisitNum).Select(y => new GetReadModuleOutDto()
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//{
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// Id = y.Id, //id
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// Name = y.VisitName,
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// ModuleType = y.InPlan ? ModuleTypeEnum.InPlanSubjectVisit : ModuleTypeEnum.OutPlanSubjectVisit, // 模块类型
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// IsUrgent = x.IsUrgent, // 是否加急
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// SubjectVisitId = y.Id, // 访视ID
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// SubjectVisitName = y.VisitName, // 访视名称
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// Status = ReadingCommon.GetVisitSubmitStateEnum(y), // 状态
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// CreateTime = y.CreateTime, // 创建时间
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// SubjectCode = y.Subject.Code, // 受试者code
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// TrialSiteCode = x.TrialSite.TrialSiteCode, // 中心Code
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// VisitNum = y.VisitNum,
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// IsFinalVisit = y.IsFinalVisit, // 是否为末次评估
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// OutPlanPreviousVisitId = y.OutPlanPreviousVisitId, // 上一访视
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// OutPlanPreviousVisitName = y.OutPlanPreviousVisit.VisitName, // 上一访视名称
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// SiteId = x.Site.Id, // 中心ID
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// IsVisit = true, // 是否为访视
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// PDState = y.PDState, // PD 进展
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// IsEnrollmentConfirm = y.IsEnrollmentConfirm, // 入组
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// SubjectId = x.Id,
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//}).ToList(),
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//ReadModuleData = x.ReadModuleList.Select(
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// z => new GetReadModuleOutDto()
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// {
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// CreateTime = z.CreateTime,
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// Id = z.Id,
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// Name = z.ModuleName,
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// SubjectId = x.Id,
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// ModuleType = z.ModuleType,
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// Status = ReadingCommon.GetVisitSubmitStateEnum(z.SubjectVisit),
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// SubjectCode = x.Code,
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// TrialSiteCode = x.TrialSite.TrialSiteCode,
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// SubjectVisitId = z.SubjectVisitId,
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// SubjectVisitName = z.SubjectVisit.VisitName, // 截止访视名称
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// CutOffVisitId = z.SubjectVisitId, // 截止访视
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// CutOffVisitName = z.SubjectVisit.VisitName, // 截止访视名称
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// ReadModuleId = z.ReadModuleId,
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// ReadModuleName = z.ReadModuleModel.ModuleName,
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// IsUrgent = z.IsUrgent
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// }).ToList(),
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});
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var pageList = await subjectQuery.ToPagedListAsync(dto.PageIndex, dto.PageSize, dto.SortField == null || dto.SortField == string.Empty ? "SiteCode" : dto.SortField,
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dto.Asc);
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return (pageList, new
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{
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MaxLength = pageList.CurrentPageData.ToList().Count()
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});
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}
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/// <summary>
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/// 获取读片模块
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/// </summary>
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[HttpPost]
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public async Task<(PageOutput<GetReadModuleDtoOut>,object)> GetReadModuleList(GetReadModuleDto dto)
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{
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#region MyRegion
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var subjectQuery = _readModuleViewRepository.WhereIf(dto.TrialId != null, x => x.TrialId == dto.TrialId)
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.WhereIf(dto.SubjectId != null, x => x.SubjectId == dto.SubjectId)
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.WhereIf(dto.TrialSiteCode != null && dto.TrialSiteCode != String.Empty, x => x.TrialSiteCode == dto.TrialSiteCode)
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.WhereIf(dto.SubjectCode != null && dto.SubjectCode != String.Empty, x => x.SubjectCode == dto.SubjectCode)
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.WhereIf(dto.ModuleType != null, x => x.ModuleType == dto.ModuleType)
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.WhereIf(dto.Status != null, x => x.Status == dto.Status)
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.WhereIf(dto.Name != null, x => x.Name.Contains(dto.Name)).OrderBy(x => x.SiteCode);
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var subjectIds = await subjectQuery.Select(x => x.SubjectId).Distinct().Skip((dto.PageIndex - 1) * dto.PageSize).Take(dto.PageSize).ToListAsync();
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List<ReadModuleView> ReadModuleViewList = await subjectQuery.Where(x => subjectIds.Contains(x.SubjectId)).ToListAsync();
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List<GetReadModuleDtoOut> getReadList = ReadModuleViewList.GroupBy(x => new { x.SubjectId, x.SiteId, x.TrialSiteCode, x.SubjectCode })
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.Select(x => new GetReadModuleDtoOut()
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{
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TrialSiteCode = x.Key.TrialSiteCode,
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SiteId = x.Key.SiteId,
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SubjectCode = x.Key.SubjectCode,
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SubjectId = x.Key.SubjectId,
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Data = x.OrderBy(x=>x.ModuleType).ThenBy(x=>x.VisitNum).ToList(),
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}).ToList();
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PageOutput<GetReadModuleDtoOut> pageOutput = new PageOutput<GetReadModuleDtoOut>()
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{
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PageSize = dto.PageSize,
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CurrentPageData = getReadList,
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PageIndex = dto.PageIndex,
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TotalCount = await subjectQuery.Select(x => x.SubjectId).Distinct().CountAsync(),
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};
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var maxcount = 0;
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pageOutput.CurrentPageData.ForEach(x =>
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{
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maxcount = maxcount < x.Data.Count ? x.Data.Count : maxcount;
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});
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return (pageOutput, new
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{
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MaxLength = maxcount,
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IsClinicalReading = await _trialRepository.Where(x => x.Id == dto.TrialId).Select(x => x.IsClinicalReading).FirstOrDefaultAsync(),
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OnlyExistsMedicalHistory = !(await _clinicalDataTrialSetRepository.AnyAsync(x => x.TrialId == dto.TrialId && x.ClinicalDataSetName != "既往局部治疗史" && x.IsConfirm))
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}) ;
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#endregion
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#region 用导航属性写的 有问题
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//var subjectQuery = _subjectRepository.WhereIf(dto.TrialId != null, x => x.TrialId == dto.TrialId)
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// .WhereIf(dto.SubjectId != null, x => x.Id == dto.SubjectId).Include(x => x.SubjectVisitList).Include(x => x.Site).Include(x => x.TrialSite)
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// .WhereIf(dto.TrialSiteCode != null, x => x.TrialSite.TrialSiteCode == dto.TrialSiteCode)
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// .WhereIf(dto.SubjectCode != null, x => x.Code == dto.SubjectCode)
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// .Select(x => new GetReadModuleDtoOut
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// {
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// TrialSiteCode = x.TrialSite.TrialSiteCode,
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// SiteCode = x.TrialSite.TrialSiteCode,
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// SiteId = x.SiteId,
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// SubjectCode = x.Code,
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// SubjectId = x.Id,
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// Data = x.SubjectVisitList.OrderByDescending(y => y.VisitNum).Select(y => new GetReadModuleOutDto()
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// {
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// Id = y.Id, //id
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// Name = y.VisitName,
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// ModuleType = y.InPlan ? ModuleTypeEnum.InPlanSubjectVisit : ModuleTypeEnum.OutPlanSubjectVisit, // 模块类型
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// IsUrgent = x.IsUrgent, // 是否加急
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// SubjectVisitId = y.Id, // 访视ID
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// SubjectVisitName = y.VisitName, // 访视名称
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// Status = ReadingCommon.GetVisitSubmitStateEnum(y), // 状态
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// CreateTime = y.CreateTime, // 创建时间
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// SubjectCode = y.Subject.Code, // 受试者code
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// TrialSiteCode = x.TrialSite.TrialSiteCode, // 中心Code
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// VisitNum = y.VisitNum,
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// IsFinalVisit = y.IsFinalVisit, // 是否为末次评估
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// OutPlanPreviousVisitId = y.OutPlanPreviousVisitId, // 上一访视
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// OutPlanPreviousVisitName = y.OutPlanPreviousVisit.VisitName, // 上一访视名称
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// SiteId = x.Site.Id, // 中心ID
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// IsVisit = true, // 是否为访视
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// PDState = y.PDState, // PD 进展
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// IsEnrollmentConfirm = y.IsEnrollmentConfirm, // 入组
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// SubjectId = x.Id,
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// }).ToList(),
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// ReadModuleData = x.ReadModuleList.Select(
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// z => new GetReadModuleOutDto()
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// {
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// CreateTime = z.CreateTime,
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// Id = z.Id,
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// Name = z.ModuleName,
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// SubjectId = x.Id,
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// ModuleType = z.ModuleType,
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// Status = ReadingCommon.GetVisitSubmitStateEnum(z.SubjectVisit),
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// SubjectCode = x.Code,
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// TrialSiteCode = x.TrialSite.TrialSiteCode,
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// SubjectVisitId = z.SubjectVisitId,
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// SubjectVisitName = z.SubjectVisit.VisitName, // 截止访视名称
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// CutOffVisitId = z.SubjectVisitId, // 截止访视
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// CutOffVisitName = z.SubjectVisit.VisitName, // 截止访视名称
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// ReadModuleId = z.ReadModuleId,
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// ReadModuleName = z.ReadModuleModel.ModuleName,
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// IsUrgent = z.IsUrgent
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// }).ToList(),
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// });
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//if (dto.ModuleType != null)
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//{
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// subjectQuery.
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//}
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//if (dto.Status != null)
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//{
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// x.Data = x.Data.Where(y => y.Status == dto.Status).ToList();
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//}
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//if (dto.Name != null)
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//{
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// x.Data = x.Data.Where(y => y.Name.Contains(y.Name)).ToList();
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//}
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//var pageList = await subjectQuery.ToPagedListAsync(dto.PageIndex, dto.PageSize, dto.SortField == null || dto.SortField == string.Empty ? "SiteCode" : dto.SortField,
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// dto.Asc);
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//pageList.CurrentPageData.ForEach(x =>
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//{
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// var outplan = x.Data.FirstOrDefault(x => x.IsFinalVisit);
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// if (outplan != null)
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// {
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// x.Data = x.Data.Where(y => y.VisitNum >= outplan.VisitNum).ToList();
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// }
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//});
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//var subjectIds = pageList.CurrentPageData.Select(x => x.SubjectId).ToList();
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//var readModules = await _readModuleRepository.Where(x => subjectIds.Contains(x.SubjectId)).Include(x => x.SubjectVisit)
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// .Include(x => x.ReadModuleModel).ToListAsync();
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//return (pageList, new
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//{
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// MaxLength = pageList.CurrentPageData.ToList().Max(x => x.Data.Count)
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//});
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#endregion
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}
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///// <summary>
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///// 访视阅片完成添加阅片期模块
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///// </summary>
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///// <returns></returns>
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//public async Task<IResponseOutput> VisitFinishReadingAddReadModule(VisitFinishReadingAddReadModuleInDto inDto)
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//{
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// var subjectVisit = await _subjectRepository.FirstOrDefaultNoTrackingAsync(x => x.Id == inDto.SubjectVisitId);
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// List<ReadingPeriodSet> readingPeriodSets= _readingPeriodSetRepository.Where(x=>x.TrialId==inDto.TrialId&&x.IsTakeEffect=&&(x.ReadingScope==ReadingScopeEnum.All||(x.ReadingScope==ReadingScopeEnum.Site&&x.ReadingPeriodSites.Select(y=>y.SiteId).Contains(subjectVisit.SiteId))))
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//}
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/// <summary>
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/// 获取单条详情信息
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/// </summary>
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/// <param name="dto"></param>
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/// <returns></returns>
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[HttpPost]
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public async Task<GetReadModuleSingleOutdto> GetReadModule(GetReadModuleSingleIndto dto)
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{
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var data = await GetReadModuleList(new GetReadModuleDto()
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{
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SubjectId = dto.SubjectId,
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});
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GetReadModuleSingleOutdto? readModule = data.Item1.CurrentPageData.FirstOrDefault().Data.Where(x => x.Id == dto.Id).Select(x => new GetReadModuleSingleOutdto()
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{
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Id = x.Id,
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ModuleType = x.ModuleType,
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SubjectVisitId = x.SubjectVisitId,
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SubjectVisitName = x.SubjectVisitName,
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Status = x.Status,
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}).FirstOrDefault();
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var stakeholderIds = new List<Guid>();
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var subjectVisit =await _subjectVisitRepository.FirstOrDefaultAsync(x => x.Id == readModule.SubjectVisitId);
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switch (readModule.Status)
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{
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case ReadModuleEnum.ImageUpload:
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stakeholderIds.AddRange(await _dicomInstanceRepository.Where(x => x.SubjectVisitId == readModule.SubjectVisitId).Select(x => x.CreateUserId).Distinct().ToListAsync());
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stakeholderIds.AddRange(await _noneDicomStudyFileRepository.Where(x => x.NoneDicomStudy.SubjectVisitId == readModule.SubjectVisitId).Select(x => x.CreateUserId).Distinct().ToListAsync());
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break;
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case ReadModuleEnum.ImageQuality:
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if (subjectVisit.PreliminaryAuditUserId != null)
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{
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stakeholderIds.Add(subjectVisit.PreliminaryAuditUserId.Value);
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}
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if (subjectVisit.ReviewAuditUserId != null)
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{
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stakeholderIds.Add(subjectVisit.ReviewAuditUserId.Value);
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}
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break;
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case ReadModuleEnum.ConsistencyCheck:
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if (subjectVisit.CheckUserId != null)
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{
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stakeholderIds.Add(subjectVisit.CheckUserId.Value);
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}
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break;
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};
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readModule.StakeholderIds = stakeholderIds.Distinct().ToList();
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readModule.StakeholderNames = await _userRepository.Where(x => readModule.StakeholderIds.Contains(x.Id)).Select(x => x.FirstName + "/" + x.LastName).ToListAsync();
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return readModule;
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}
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/// <summary>
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/// 添加阅片的时候 获取访视
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/// </summary>
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/// <param name="inDto"></param>
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/// <returns></returns>
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public async Task<List<GetSubjectReadVisitsOutDto>> GetSubjectReadVisitList(GetSubjectReadVisitsInDto inDto)
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{
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var maxReadVisit = await _readModuleRepository.Where(x => x.SubjectId == inDto.SubjectId&&x.ReadingSetType==inDto.ReadingSetType).OrderByDescending(x=>x.VisitNum).FirstOrDefaultAsync();
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var maxReadVisitNum= maxReadVisit==null?-1:maxReadVisit.VisitNum;
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var visitQuery = _subjectVisitRepository.Where(x => x.SubjectId == inDto.SubjectId && x.LatestScanDate != null&&!x.IsLostVisit);
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var finalVisitNum = await visitQuery.Where(x => x.IsFinalVisit).Select(x => x.VisitNum).FirstOrDefaultAsync();
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var readModulequery = _readModuleRepository.AsQueryable();
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var resultlist= await visitQuery.WhereIf(finalVisitNum != null&& finalVisitNum!=0, x => x.VisitNum <= finalVisitNum)
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.Where(x=>x.VisitNum> maxReadVisitNum)
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.Where(x => readModulequery.Where(y => y.SubjectVisitId == x.Id && y.ReadingSetType == inDto.ReadingSetType).Count() == 0).OrderBy(x => finalVisitNum)
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.Select(x => new GetSubjectReadVisitsOutDto()
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{
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SubjectVisitId = x.Id,
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VisitName = x.VisitName,
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VisitNum = x.VisitNum,
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}).ToListAsync();
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return resultlist;
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}
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/// <summary>
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/// 添加阅片期
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/// </summary>
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/// <param name="dto"></param>
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/// <returns></returns>
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[HttpPost]
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public async Task<IResponseOutput> AddReadModule(ReadModuleAddDto dto)
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{
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var visitQuery = _subjectVisitRepository.Where(x => x.SubjectId == dto.SubjectId);
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visitQuery = visitQuery
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//.WhereIf(dto.ExpirationDate != null, x => x.LatestScanDate <= dto.ExpirationDate.Value)
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.WhereIf(dto.ExpirationVisitNum != null, x => x.VisitNum == dto.ExpirationVisitNum.Value);
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var visit = visitQuery.OrderByDescending(x => x.VisitNum).FirstOrDefault();
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if (visit != null)
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{
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await _readModuleRepository.AddAsync(new ReadModule()
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{
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Id= NewId.NextGuid(),
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SubjectId = dto.SubjectId,
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ModuleType = dto.ReadingSetType==ReadingSetType.ImageReading? ModuleTypeEnum.Read: ModuleTypeEnum.Oncology,
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IsUrgent = visit.IsUrgent,
|
|
ModuleName = dto.Name,
|
|
SubjectVisitId = visit.Id,
|
|
ReadingSetType= dto.ReadingSetType,
|
|
TrialId= dto.TrialId,
|
|
VisitNum= visit.VisitNum,
|
|
Status = ReadModuleEnum.TaskAllocation,
|
|
|
|
});
|
|
var res = await _readModuleRepository.SaveChangesAsync();
|
|
return ResponseOutput.Ok(res);
|
|
}
|
|
else
|
|
{
|
|
return ResponseOutput.NotOk("No qualified visit was found ");
|
|
}
|
|
|
|
|
|
|
|
}
|
|
|
|
///// <summary>
|
|
///// 新增或者修改
|
|
///// </summary>
|
|
///// <param name="addOrEditReadModule"></param>
|
|
///// <returns></returns>
|
|
//[HttpPost]
|
|
//public async Task<IResponseOutput> AddOrUpdateReadModuleService(ReadModuleAddOrEdit addOrEditReadModule)
|
|
//{
|
|
// var entity = await _repository.InsertOrUpdateAsync<ReadModule, ReadModuleAddOrEdit>(addOrEditReadModule, true);
|
|
// return ResponseOutput.Ok(entity.Id.ToString());
|
|
//}
|
|
|
|
|
|
|
|
/// <summary>
|
|
/// 删除
|
|
/// </summary>
|
|
/// <param name="readModuleId"></param>
|
|
/// <returns></returns>
|
|
[HttpDelete("{readModuleId:guid}")]
|
|
public async Task<IResponseOutput> DeleteReadModule(Guid readModuleId)
|
|
{
|
|
await _readModuleRepository.DeleteFromQueryAsync(t => t.Id == readModuleId, true);
|
|
return ResponseOutput.Result(true);
|
|
}
|
|
|
|
|
|
}
|
|
}
|