修改irc 匿名化
continuous-integration/drone/push Build is passing
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continuous-integration/drone/push Build is passing
Details
parent
fbd128138d
commit
1514694e37
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using IRaCIS.Core.Domain.Models;
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using IRaCIS.Core.Infra.EFCore;
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using Microsoft.EntityFrameworkCore;
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namespace IRaCIS.Core.SCP.Service;
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public static class CacheKeys
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{
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//项目缓存
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public static string Trial(string trialIdStr) => $"TrialId:{trialIdStr}";
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//检查编号递增锁
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public static string TrialStudyMaxCode(Guid trialId) => $"TrialStudyMaxCode:{trialId}";
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public static string TrialStudyUidUploading(Guid trialId, string studyUid) => $"TrialStudyUid:{trialId}_{studyUid}";
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//CRC上传影像提交锁key
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public static string TrialStudyUidDBLock(Guid trialId, string studyUid) => $"TrialStudyUidDBLock:{trialId}_{studyUid}";
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public static string TrialTaskStudyUidUploading(Guid trialId, Guid visiTaskId, string studyUid) => $"TrialStudyUid:{trialId}_{visiTaskId}_{studyUid}";
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//影像后处理上传提交锁key
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public static string TrialTaskStudyUidDBLock(Guid trialId, Guid visiTaskId, string studyUid) => $"TrialTaskStudyUidDBLock:{trialId}_{visiTaskId}_{studyUid}";
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//系统匿名化
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public static string SystemAnonymization => $"SystemAnonymization";
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//前端国际化
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public static string FrontInternational => $"FrontInternationalList";
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//登录挤账号
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public static string UserToken(Guid userId) => $"UserToken:{userId}";
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//超时没请求接口自动退出
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public static string UserAutoLoginOut(Guid userId) => $"UserAutoLoginOut:{userId}";
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public static string UserDisable(Guid userId) => $"UserDisable:{userId}";
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public static string UserRoleDisable(Guid userRoleId) => $"UserRoleDisable:{userRoleId}";
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/// <summary>
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/// 用户登录错误 限制登录
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/// </summary>
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/// <param name="userName"></param>
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/// <returns></returns>
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public static string UserLoginError(string userName) => $"login-failures:{userName}";
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/// <summary>
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/// 跳过阅片
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/// </summary>
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/// <param name="userId"></param>
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/// <returns></returns>
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public static string SkipReadingCacheKey(Guid userId) => $"{userId}SkipReadingCache";
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/// <summary>
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/// 开始阅片时间
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/// </summary>
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/// <param name="userId"></param>
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/// <returns></returns>
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public static string StartReadingTimeKey(Guid userId) => $"{userId}StartReadingTime";
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/// <summary>
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/// 开始休息时间
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/// </summary>
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/// <param name="userId"></param>
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/// <returns></returns>
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public static string StartRestTime(Guid userId) => $"{userId}StartRestTime";
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//每个用户 每个浏览器独立时间
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public static string UserMFAVerifyPass(Guid userId, string browserFingerprint) => $"UserMFAVerifyPass:{userId}:{browserFingerprint}";
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public static string TrialSiteInfo(Guid trialSiteId) => $"{trialSiteId}TrialSiteInfo";
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}
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public static class CacheHelper
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{
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public static async Task<string?> GetTrialStatusAsync(Guid trialId, IRepository<Trial> _trialRepository)
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{
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var statusStr = await _trialRepository.Where(t => t.Id == trialId, ignoreQueryFilters: true).Select(t => t.TrialStatusStr).FirstOrDefaultAsync();
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return statusStr;
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}
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public class TrialSiteInfoDTO
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{
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public string TrialSiteCode { get; set; }
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public string TrialCode { get; set; }
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}
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public static async Task<TrialSiteInfoDTO> GetTrialSiteInfo(Guid trialSiteId, IRepository<TrialSite> _trialSiteRepository)
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{
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var obj = await _trialSiteRepository.Where(t => t.Id == trialSiteId, ignoreQueryFilters: true).Select(t => new TrialSiteInfoDTO { TrialCode= t.Trial.TrialCode, TrialSiteCode= t.TrialSiteCode }).FirstOrDefaultAsync();
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return obj??new TrialSiteInfoDTO();
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}
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public static async Task<List<SystemAnonymization>> GetSystemAnonymizationListAsync(IRepository<SystemAnonymization> _systemAnonymizationRepository)
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{
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var list = await _systemAnonymizationRepository.Where(t => t.IsEnable).ToListAsync();
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return list;
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}
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}
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@ -1,49 +1,36 @@
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using IRaCIS.Core.Domain.Share;
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using System.Text;
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using Microsoft.AspNetCore.Hosting;
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using IRaCIS.Core.Infrastructure;
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using Medallion.Threading;
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using FellowOakDicom;
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using FellowOakDicom;
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using FellowOakDicom.Imaging.Codec;
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using System.Data;
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using IRaCIS.Core.Domain.Models;
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using FellowOakDicom.Network;
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using IRaCIS.Core.SCP.Service;
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using IRaCIS.Core.Domain.Models;
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using IRaCIS.Core.Domain.Share;
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using IRaCIS.Core.Infra.EFCore;
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using MassTransit;
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using System.Runtime.Intrinsics.X86;
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using Serilog.Sinks.File;
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using IRaCIS.Core.Infrastructure;
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using IRaCIS.Core.Infrastructure.Extention;
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using IRaCIS.Core.SCP.Service;
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using MassTransit;
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using Medallion.Threading;
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using Microsoft.AspNetCore.Hosting;
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using Serilog.Sinks.File;
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using System.Data;
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using System.Runtime.Intrinsics.X86;
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using System.Text;
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using ZiggyCreatures.Caching.Fusion;
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using static IRaCIS.Core.SCP.Service.CacheHelper;
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namespace IRaCIS.Core.SCP.Service
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{
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public class DicomArchiveService : BaseService, IDicomArchiveService
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public class DicomArchiveService(IRepository<SCPPatient> _patientRepository,
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IRepository<SCPStudy> _studyRepository,
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IRepository<SCPSeries> _seriesRepository,
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IRepository<SCPInstance> _instanceRepository,
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IDistributedLockProvider _distributedLockProvider,
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IRepository<SystemAnonymization> _systemAnonymizationRepository,
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IRepository<TrialSite> _trialSiteRepository,
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IFusionCache _fusionCache
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) : BaseService, IDicomArchiveService
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{
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private readonly IRepository<SCPPatient> _patientRepository;
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private readonly IRepository<SCPStudy> _studyRepository;
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private readonly IRepository<SCPSeries> _seriesRepository;
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private readonly IRepository<SCPInstance> _instanceRepository;
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private readonly IRepository<Dictionary> _dictionaryRepository;
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private readonly IDistributedLockProvider _distributedLockProvider;
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private List<Guid> _instanceIdList = new List<Guid>();
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public DicomArchiveService(IRepository<SCPPatient> patientRepository, IRepository<SCPStudy> studyRepository,
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IRepository<SCPSeries> seriesRepository,
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IRepository<SCPInstance> instanceRepository,
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IRepository<Dictionary> dictionaryRepository,
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IDistributedLockProvider distributedLockProvider)
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{
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_distributedLockProvider = distributedLockProvider;
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_studyRepository = studyRepository;
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_patientRepository = patientRepository;
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_seriesRepository = seriesRepository;
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_instanceRepository = instanceRepository;
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_dictionaryRepository = dictionaryRepository;
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}
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@ -53,18 +40,79 @@ namespace IRaCIS.Core.SCP.Service
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/// <param name="dataset"></param>
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/// <returns></returns>
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/// <exception cref="NotImplementedException"></exception>
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public async Task<Guid> ArchiveDicomFileAsync(DicomFile dicomFile, Guid trialId, Guid trialSiteId, string fileRelativePath, string callingAE, string calledAE,long fileSize)
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public async Task<Guid> ArchiveDicomFileAsync(DicomFile dicomFile, Guid trialId, Guid trialSiteId, string fileRelativePath, string callingAE, string calledAE, long fileSize)
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{
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var dataset = dicomFile.Dataset;
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#region 匿名化
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var anonymizeList = await _fusionCache.GetOrSetAsync(CacheKeys.SystemAnonymization, _ => CacheHelper.GetSystemAnonymizationListAsync(_systemAnonymizationRepository), TimeSpan.FromDays(7));
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var trialSiteInfo = await _fusionCache.GetOrSetAsync(CacheKeys.TrialSiteInfo(trialSiteId), _ => CacheHelper.GetTrialSiteInfo(trialSiteId, _trialSiteRepository), TimeSpan.FromMinutes(2));
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var fixedFiledList = anonymizeList.Where(t => t.IsFixed).ToList();
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var ircFiledList = anonymizeList.Where(t => t.IsFixed == false).ToList();
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foreach (var item in fixedFiledList)
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{
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var dicomTag = new DicomTag(Convert.ToUInt16(item.Group, 16), Convert.ToUInt16(item.Element, 16));
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dataset.AddOrUpdate(dicomTag, item.ReplaceValue);
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}
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foreach (var item in ircFiledList)
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{
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var dicomTag = new DicomTag(Convert.ToUInt16(item.Group, 16), Convert.ToUInt16(item.Element, 16));
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if (dicomTag == DicomTag.ClinicalTrialProtocolID)
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{
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dataset.AddOrUpdate(dicomTag, trialSiteInfo.TrialCode);
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}
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if (dicomTag == DicomTag.ClinicalTrialSiteID)
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{
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dataset.AddOrUpdate(dicomTag, trialSiteInfo.TrialSiteCode);
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}
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if (dicomTag == DicomTag.ClinicalTrialSubjectID)
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{
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dataset.AddOrUpdate(dicomTag, "");
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}
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if (dicomTag == DicomTag.ClinicalTrialTimePointID)
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{
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dataset.AddOrUpdate(dicomTag, "");
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}
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if (dicomTag == DicomTag.PatientID)
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{
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var pid = dataset.GetSingleValueOrDefault(DicomTag.PatientID, string.Empty);
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dataset.AddOrUpdate(dicomTag, trialSiteInfo.TrialCode + "_" + pid);
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}
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}
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#endregion
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string studyInstanceUid = dataset.GetString(DicomTag.StudyInstanceUID);
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string seriesInstanceUid = dataset.GetString(DicomTag.SeriesInstanceUID);
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string sopInstanceUid = dataset.GetString(DicomTag.SOPInstanceUID);
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string patientIdStr = dataset.GetSingleValueOrDefault(DicomTag.PatientID,string.Empty);
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string patientIdStr = dataset.GetSingleValueOrDefault(DicomTag.PatientID, string.Empty);
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//Guid patientId= IdentifierHelper.CreateGuid(patientIdStr);
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Guid studyId = IdentifierHelper.CreateGuid(studyInstanceUid,trialId.ToString());
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Guid studyId = IdentifierHelper.CreateGuid(studyInstanceUid, trialId.ToString());
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Guid seriesId = IdentifierHelper.CreateGuid(studyInstanceUid, seriesInstanceUid, trialId.ToString());
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Guid instanceId = IdentifierHelper.CreateGuid(studyInstanceUid, seriesInstanceUid, sopInstanceUid, trialId.ToString());
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@ -77,9 +125,9 @@ namespace IRaCIS.Core.SCP.Service
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//using (@lock.Acquire())
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{
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var findPatient = await _patientRepository.FirstOrDefaultAsync(t => t.PatientIdStr == patientIdStr && t.TrialSiteId==trialSiteId );
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var findStudy = await _studyRepository.FirstOrDefaultAsync(t=>t.Id== studyId);
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var findSerice = await _seriesRepository.FirstOrDefaultAsync(t => t.Id == seriesId);
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var findPatient = await _patientRepository.FirstOrDefaultAsync(t => t.PatientIdStr == patientIdStr && t.TrialSiteId == trialSiteId);
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var findStudy = await _studyRepository.FirstOrDefaultAsync(t => t.Id == studyId);
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var findSerice = await _seriesRepository.FirstOrDefaultAsync(t => t.Id == seriesId);
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var findInstance = await _instanceRepository.FirstOrDefaultAsync(t => t.Id == instanceId);
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DateTime? studyTime = dataset.GetSingleValueOrDefault(DicomTag.StudyDate, string.Empty) == string.Empty ? null : dataset.GetSingleValue<DateTime>(DicomTag.StudyDate).Add(dataset.GetSingleValueOrDefault(DicomTag.StudyTime, string.Empty) == string.Empty ? TimeSpan.Zero : dataset.GetSingleValue<DateTime>(DicomTag.StudyTime).TimeOfDay);
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@ -93,8 +141,8 @@ namespace IRaCIS.Core.SCP.Service
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findPatient = new SCPPatient()
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{
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Id = NewId.NextSequentialGuid(),
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TrialId=trialId,
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TrialSiteId=trialSiteId,
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TrialId = trialId,
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TrialSiteId = trialSiteId,
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PatientIdStr = dataset.GetSingleValueOrDefault(DicomTag.PatientID, string.Empty),
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PatientName = dataset.GetSingleValueOrDefault(DicomTag.PatientName, string.Empty),
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PatientAge = dataset.GetSingleValueOrDefault(DicomTag.PatientAge, string.Empty),
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@ -122,7 +170,7 @@ namespace IRaCIS.Core.SCP.Service
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DateTime birthDate;
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if (findPatient.PatientAge == string.Empty && studyTime.HasValue && DateTime.TryParse(findPatient.PatientBirthDate,out birthDate))
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if (findPatient.PatientAge == string.Empty && studyTime.HasValue && DateTime.TryParse(findPatient.PatientBirthDate, out birthDate))
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{
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var patientAge = studyTime.Value.Year - birthDate.Year;
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// 如果生日还未到,年龄减去一岁
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@ -289,7 +337,7 @@ namespace IRaCIS.Core.SCP.Service
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RadiopharmaceuticalInformationSequence = dataset.GetSingleValueOrDefault(DicomTag.RadiopharmaceuticalInformationSequence, string.Empty),
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AcquisitionDate = dataset.GetSingleValueOrDefault(DicomTag.AcquisitionDate, string.Empty),
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InstanceCount = 0
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};
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@ -358,7 +406,7 @@ namespace IRaCIS.Core.SCP.Service
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Path = fileRelativePath,
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FileSize= fileSize,
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FileSize = fileSize,
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};
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@ -398,7 +446,7 @@ namespace IRaCIS.Core.SCP.Service
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}
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else
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{
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await _instanceRepository.BatchUpdateNoTrackingAsync(t => t.Id == instanceId, u => new SCPInstance() { Path = fileRelativePath,FileSize=fileSize });
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await _instanceRepository.BatchUpdateNoTrackingAsync(t => t.Id == instanceId, u => new SCPInstance() { Path = fileRelativePath, FileSize = fileSize });
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}
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await _studyRepository.SaveChangesAsync();
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