修改影响上传 切换磁盘预提交

Uat_Study
hang 2023-04-26 18:27:00 +08:00
parent 6a7971f314
commit 8c43bcf030
14 changed files with 455 additions and 109 deletions

View File

@ -26,12 +26,6 @@ namespace IRaCIS.Core.API
RequestPath = $"/{StaticData.Folder.IRaCISDataFolder}", RequestPath = $"/{StaticData.Folder.IRaCISDataFolder}",
ServeUnknownFileTypes = true, ServeUnknownFileTypes = true,
DefaultContentType = "application/octet-stream" DefaultContentType = "application/octet-stream"
// // Set up custom content types - associating file extension to MIME type
//var provider = new FileExtensionContentTypeProvider();
// // Add new mappings
// provider.Mappings[".myapp"] = "application/x-msdownload";
}); });
} }
} }

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@ -1,10 +1,12 @@
using IRaCIS.Core.Domain.Share; using IRaCIS.Core.Application.Helper;
using IRaCIS.Core.Domain.Share;
using Microsoft.AspNetCore.Builder; using Microsoft.AspNetCore.Builder;
using Microsoft.AspNetCore.Hosting; using Microsoft.AspNetCore.Hosting;
using Microsoft.AspNetCore.Http; using Microsoft.AspNetCore.Http;
using Microsoft.AspNetCore.StaticFiles; using Microsoft.AspNetCore.StaticFiles;
using Microsoft.Extensions.FileProviders; using Microsoft.Extensions.FileProviders;
using Microsoft.Extensions.FileProviders.Physical; using Microsoft.Extensions.FileProviders.Physical;
using Microsoft.Extensions.Hosting;
using Microsoft.Extensions.Hosting.Internal; using Microsoft.Extensions.Hosting.Internal;
using Microsoft.Extensions.Logging; using Microsoft.Extensions.Logging;
using Microsoft.Extensions.Options; using Microsoft.Extensions.Options;
@ -24,12 +26,21 @@ namespace IRaCIS.Core.API
private readonly StaticFileOptions _options; private readonly StaticFileOptions _options;
private readonly ILoggerFactory _loggerFactory; private readonly ILoggerFactory _loggerFactory;
private string iRaCISDefaultDataFolder = string.Empty;
public MultiDiskStaticFilesMiddleware(RequestDelegate next, IWebHostEnvironment hostingEnv, StaticFileOptions options, ILoggerFactory loggerFactory) public MultiDiskStaticFilesMiddleware(RequestDelegate next, IWebHostEnvironment hostingEnv, StaticFileOptions options, ILoggerFactory loggerFactory)
{ {
_next = next; _next = next;
_hostingEnv = hostingEnv; _hostingEnv = hostingEnv;
_options = options; _options = options;
_loggerFactory = loggerFactory; _loggerFactory = loggerFactory;
iRaCISDefaultDataFolder = FileStoreHelper.GetIRaCISRootDataFolder(_hostingEnv);
if (!Directory.Exists(iRaCISDefaultDataFolder))
{
Directory.CreateDirectory(iRaCISDefaultDataFolder);
}
} }
public async Task Invoke(HttpContext context) public async Task Invoke(HttpContext context)
@ -39,52 +50,96 @@ namespace IRaCIS.Core.API
var isDicomFile = path.Contains($"{StaticData.Folder.DicomFolder}"); var isDicomFile = path.Contains($"{StaticData.Folder.DicomFolder}");
var isFind = false; var defaultFileProvider = new PhysicalFileProvider(iRaCISDefaultDataFolder);
var staticFileOptions = new StaticFileOptions
{
FileProvider = defaultFileProvider,
RequestPath = $"/{StaticData.Folder.IRaCISDataFolder}",
ServeUnknownFileTypes = true,
DefaultContentType = "application/octet-stream"
};
var defaultRoot = Path.GetPathRoot(iRaCISDefaultDataFolder);
//先从默认里面去找
if (isIRacisFile) if (isIRacisFile)
{ {
if (defaultFileProvider.GetFileInfo(context.Request.Path).Exists)
{
var staticFileMiddleware = new StaticFileMiddleware(_next, _hostingEnv, Options.Create(staticFileOptions), _loggerFactory);
await staticFileMiddleware.Invoke(context);
return;
} }
}
//没找到
//dicom影像从多个文件夹尝试因为会存在切换磁盘
if (isDicomFile) if (isDicomFile)
{ {
var disks = GetDisks().Where(t=>!t.Contains(defaultRoot));
foreach (var item in disks)
{
var otherFileStoreFolder = Path.Combine(item, _hostingEnv.EnvironmentName);
var otherFileProvider= new PhysicalFileProvider(otherFileStoreFolder);
var otherStaticFileOptions = new StaticFileOptions
{
FileProvider = otherFileProvider,
RequestPath = $"/{StaticData.Folder.IRaCISDataFolder}",
ServeUnknownFileTypes = true,
DefaultContentType = "application/octet-stream"
};
if (otherFileProvider.GetFileInfo(context.Request.Path).Exists)
{
var staticFileMiddleware = new StaticFileMiddleware(_next, _hostingEnv, Options.Create(staticFileOptions), _loggerFactory);
await staticFileMiddleware.Invoke(context);
return;
}
}
} }
// 如果所有磁盘都不存在所请求的文件,则将请求传递给下一个中间件组件。 // 如果所有磁盘都不存在所请求的文件,则将请求传递给下一个中间件组件。
await _next.Invoke(context); await _next.Invoke(context);
} }
private async Task ServeFileAsync(HttpContext context, IFileInfo fileInfo)
{
var response = context.Response;
response.ContentType = GetContentType(fileInfo.PhysicalPath);
using (var fileStream = fileInfo.CreateReadStream())
{
await fileStream.CopyToAsync(response.Body);
}
}
private string[] GetDisks() private string[] GetDisks()
{ {
// 获取系统中所有可用的磁盘 // 获取系统中所有可用的磁盘
return DriveInfo.GetDrives() return DriveInfo.GetDrives()
.Where(d => d.IsReady && d.DriveType == DriveType.Fixed) .Where(d => d.IsReady && d.DriveType == DriveType.Fixed).Where(t => !t.Name.Contains("C") && !t.Name.Contains("c"))
.Select(d => d.RootDirectory.FullName) .Select(d => d.RootDirectory.FullName)
.ToArray(); .ToArray();
} }
private static string GetContentType(string path)
{
var provider = new FileExtensionContentTypeProvider();
if (!provider.TryGetContentType(path, out var contentType))
{
contentType = "application/octet-stream";
}
return contentType; //private static string GetContentType(string path)
} //{
// var provider = new FileExtensionContentTypeProvider();
// if (!provider.TryGetContentType(path, out var contentType))
// {
// contentType = "application/octet-stream";
// }
// return contentType;
//}
//private async Task ServeFileAsync(HttpContext context, IFileInfo fileInfo)
//{
// var response = context.Response;
// response.ContentType = GetContentType(fileInfo.PhysicalPath);
// using (var fileStream = fileInfo.CreateReadStream())
// {
// await fileStream.CopyToAsync(response.Body);
// }
//}
} }

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@ -92,7 +92,7 @@ namespace IRaCIS.Core.Application.Service.Common
} }
else else
{ {
bestStoreRootFolder = Path.Combine(drives.FirstOrDefault()?.Name, _hostEnvironment.EnvironmentName); bestStoreRootFolder = Path.Combine(bestDrive?.RootDirectory.FullName, _hostEnvironment.EnvironmentName);
} }

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@ -45,11 +45,9 @@ namespace IRaCIS.Core.Application.Contracts
public string ResearchProgramNo { get; set; } = string.Empty; public string ResearchProgramNo { get; set; } = string.Empty;
public string TrialIndication { get; set; } = string.Empty; public string TrialIndication { get; set; } = string.Empty;
public CheckStateEnum CheckState { get; set; }
public decimal VisitNum { get; set; } public decimal VisitNum { get; set; }
public string SVUPDES { get; set; } = string.Empty;
public string VisitName { get; set; } = string.Empty; public string VisitName { get; set; } = string.Empty;
public string Sponsor { get; set; } = string.Empty; public string Sponsor { get; set; } = string.Empty;
public Guid TrialId { get; set; } public Guid TrialId { get; set; }
@ -57,10 +55,15 @@ namespace IRaCIS.Core.Application.Contracts
public Guid SubjectId { get; set; } public Guid SubjectId { get; set; }
public Guid SubjectVisitId { get; set; } public Guid SubjectVisitId { get; set; }
public SubmitStateEnum SubmitState { get; set; }
public AuditStateEnum AuditState { get; set; } //public string SVUPDES { get; set; } = string.Empty;
public ForwardStateEnum ForwardState { get; set; }
//public CheckStateEnum CheckState { get; set; }
//public SubmitStateEnum SubmitState { get; set; }
//public AuditStateEnum AuditState { get; set; }
//public ForwardStateEnum ForwardState { get; set; }
//public string SubjectName => LastName + " / " + FirstName; //public string SubjectName => LastName + " / " + FirstName;
//public string FirstName { get; set; } = string.Empty; //public string FirstName { get; set; } = string.Empty;

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@ -174,4 +174,116 @@ namespace IRaCIS.Core.Application.Contracts
public string[]? VisitPlanArray { get; set; } public string[]? VisitPlanArray { get; set; }
} }
public class NewArchiveStudyCommand
{
[NotDefault]
public Guid TrialId { get; set; }
[NotDefault]
public Guid SiteId { get; set; }
[NotDefault]
public Guid SubjectId { get; set; }
[NotDefault]
public Guid SubjectVisitId { get; set; }
public bool IsAdd { get; set; }
public AddOrUpdateStudyDto Study { get; set; }
public List<AddOrUpdateSeriesDto> SeriesList { get; set; }
public List<AddInstanceDto> InstanceList { get; set; }
}
public class AddOrUpdateStudyDto
{
public Guid? Id { get; set; }
public string StudyId { get; set; } = string.Empty;
//public int Code { get; set; } = 0;
//public string StudyCode { get; set; } = string.Empty;
public string StudyInstanceUid { get; set; } = string.Empty;
public DateTime? StudyTime { get; set; }
public string Modalities { get; set; } = string.Empty;
public string Description { get; set; } = string.Empty;
public int SeriesCount { get; set; } = 0;
public int InstanceCount { get; set; } = 0;
public string InstitutionName { get; set; } = string.Empty;
public string PatientId { get; set; } = string.Empty;
public string PatientName { get; set; } = string.Empty;
public string PatientAge { get; set; } = string.Empty;
public string PatientSex { get; set; } = string.Empty;
public string AccessionNumber { get; set; } = string.Empty;
public string PatientBirthDate { get; set; } = string.Empty;
public string AcquisitionTime { get; set; } = string.Empty;
public string AcquisitionNumber { get; set; } = string.Empty;
public string TriggerTime { get; set; } = string.Empty;
public string BodyPartExamined { get; set; } = string.Empty;
}
public class AddOrUpdateSeriesDto
{
public Guid? Id { get; set; }
public string StudyInstanceUid { get; set; }
public string SeriesInstanceUid { get; set; }
public int SeriesNumber { get; set; }
public DateTime? SeriesTime { get; set; }
public string Modality { get; set; }
public string Description { get; set; }
public int InstanceCount { get; set; }
public string SliceThickness { get; set; }
public string ImagePositionPatient { get; set; }
public string ImageOrientationPatient { get; set; }
public string BodyPartExamined { get; set; }
public string SequenceName { get; set; }
public string ProtocolName { get; set; }
public string ImagerPixelSpacing { get; set; }
public string AcquisitionTime { get; set; } = string.Empty;
public string AcquisitionNumber { get; set; } = string.Empty;
public string TriggerTime { get; set; } = string.Empty;
}
public class AddInstanceDto
{
public string StudyInstanceUid { get; set; }
public string SeriesInstanceUid { get; set; }
public string SopInstanceUid { get; set; }
public int InstanceNumber { get; set; }
public DateTime? InstanceTime { get; set; }
public bool CPIStatus { get; set; }
public int ImageRows { get; set; }
public int ImageColumns { get; set; }
public int SliceLocation { get; set; }
public string SliceThickness { get; set; }
public int NumberOfFrames { get; set; }
public string PixelSpacing { get; set; }
public string ImagerPixelSpacing { get; set; }
public string FrameOfReferenceUID { get; set; }
public string WindowCenter { get; set; }
public string WindowWidth { get; set; }
public bool Anonymize { get; set; }
public string Path { get; set; }
}
} }

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@ -12,6 +12,6 @@ namespace IRaCIS.Core.Application.Contracts
DicomTrialSiteSubjectInfo GetSaveToDicomInfo(Guid subjectVisitId); DicomTrialSiteSubjectInfo GetSaveToDicomInfo(Guid subjectVisitId);
IResponseOutput<DicomStudyDTO> Item(Guid studyId); IResponseOutput<DicomStudyDTO> Item(Guid studyId);
Task<FileContentResult> Preview(Guid studyId); Task<FileContentResult> Preview(Guid studyId);
IResponseOutput<List<VerifyStudyUploadResult>> VerifyStudyAllowUpload(VerifyUploadOrReupload verifyInfo); //IResponseOutput<List<VerifyStudyUploadResult>> VerifyStudyAllowUpload(VerifyUploadOrReupload verifyInfo);
} }
} }

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@ -7,12 +7,15 @@ using EasyCaching.Core;
using System.Linq.Expressions; using System.Linq.Expressions;
using IRaCIS.Core.Application.Helper; using IRaCIS.Core.Application.Helper;
using IRaCIS.Core.Infrastructure; using IRaCIS.Core.Infrastructure;
using DocumentFormat.OpenXml.Presentation;
using IRaCIS.Core.Domain.Models;
namespace IRaCIS.Core.Application.Service.ImageAndDoc namespace IRaCIS.Core.Application.Service.ImageAndDoc
{ {
[ApiExplorerSettings(GroupName = "Image")] [ApiExplorerSettings(GroupName = "Image")]
public class StudyService : BaseService, IStudyService public class StudyService : BaseService, IStudyService
{ {
private static object lockCodeGenerate = new object();
private readonly IEasyCachingProvider _provider; private readonly IEasyCachingProvider _provider;
@ -20,16 +23,185 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
private readonly IRepository<SubjectVisit> _subjectVisitRepository; private readonly IRepository<SubjectVisit> _subjectVisitRepository;
private readonly IRepository<DicomInstance> _dicomInstanceRepository; private readonly IRepository<DicomInstance> _dicomInstanceRepository;
private readonly IRepository<DicomSeries> _dicomSeriesRepository; private readonly IRepository<DicomSeries> _dicomSeriesRepository;
private readonly IRepository<DicomStudy> _dicomstudyRepository;
private readonly IRepository<Dictionary> _dictionaryRepository;
public StudyService(IEasyCachingProvider provider public StudyService(IEasyCachingProvider provider
, IRepository<SubjectVisit> subjectVisitRepository, , IRepository<SubjectVisit> subjectVisitRepository,
IRepository<DicomInstance> dicomInstanceRepository, IRepository<DicomInstance> dicomInstanceRepository,
IRepository<DicomSeries> dicomSeriesRepository) IRepository<DicomSeries> dicomSeriesRepository, IRepository<DicomStudy> dicomstudyRepository, IRepository<Dictionary> dictionaryRepository)
{ {
_provider = provider; _provider = provider;
_subjectVisitRepository = subjectVisitRepository; _subjectVisitRepository = subjectVisitRepository;
_dicomInstanceRepository = dicomInstanceRepository; _dicomInstanceRepository = dicomInstanceRepository;
_dicomSeriesRepository = dicomSeriesRepository; _dicomSeriesRepository = dicomSeriesRepository;
_dicomstudyRepository = dicomstudyRepository;
_dictionaryRepository = dictionaryRepository;
}
private void SpecialArchiveStudyDeal(DicomStudy study)
{
#region 特殊逻辑
if (study.PatientBirthDate.Length == 8)
{
study.PatientBirthDate = $"{study.PatientBirthDate[0]}{study.PatientBirthDate[1]}{study.PatientBirthDate[2]}{study.PatientBirthDate[3]}-{study.PatientBirthDate[4]}{study.PatientBirthDate[5]}-{study.PatientBirthDate[6]}{study.PatientBirthDate[7]}";
}
var dicModalityList = _dictionaryRepository.Where(t => t.Code == "Modality").SelectMany(t => t.ChildList.Select(c => c.Value)).ToList();
var modality = study.Modalities;
var modalityForEdit = dicModalityList.Contains(modality) ? modality : String.Empty;
if (modality == "MR")
{
modalityForEdit = "MRI";
}
if (modality == "PT")
{
modalityForEdit = "PET";
}
if (modality == "PT、CT")
{
modalityForEdit = "PET-CT";
}
study.ModalityForEdit = modalityForEdit;
#endregion
}
public async Task<IResponseOutput> AddOrUpdateArchiveStudy(NewArchiveStudyCommand incommand)
{
var trialId = incommand.TrialId;
if (incommand.IsAdd)
{
var study = _mapper.Map<DicomStudy>(incommand.Study);
lock (lockCodeGenerate)
{
//查询数据库获取最大的Code 没有记录则为0
var dbStudyCodeIntMax = _dicomstudyRepository.Where(s => s.TrialId == trialId).Select(t => t.Code).DefaultIfEmpty().Max();
//获取缓存中的值 并发的时候,需要记录,已被占用的值 这样其他线程在此占用的最大的值上递增
var cacheMaxCodeInt = _provider.Get<int>($"{trialId}_{StaticData.CacheKey.StudyMaxCode}").Value;
int currentNextCodeInt = cacheMaxCodeInt > dbStudyCodeIntMax ? cacheMaxCodeInt + 1 : dbStudyCodeIntMax + 1;
study.Code = currentNextCodeInt;
study.StudyCode = AppSettings.GetCodeStr(currentNextCodeInt, nameof(DicomStudy));
_provider.Set<int>($"{trialId}_{StaticData.CacheKey.StudyMaxCode}", study.Code, TimeSpan.FromMinutes(30));
}
study.Id = IdentifierHelper.CreateGuid(incommand.Study.StudyInstanceUid, incommand.TrialId.ToString());
study.TrialId = incommand.TrialId;
study.SiteId = incommand.SiteId;
study.SubjectId = incommand.SubjectId;
study.SubjectVisitId = incommand.SubjectVisitId;
//特殊处理逻辑
SpecialArchiveStudyDeal(study);
await _dicomstudyRepository.AddAsync(study);
foreach (var seriesItem in incommand.SeriesList)
{
var series = _mapper.Map<DicomSeries>(seriesItem);
series.Id = IdentifierHelper.CreateGuid(seriesItem.SeriesInstanceUid, incommand.TrialId.ToString());
series.StudyId = study.Id;
series.TrialId = incommand.TrialId;
series.SiteId = incommand.SiteId;
series.SubjectId = incommand.SubjectId;
series.SubjectVisitId = incommand.SubjectVisitId;
await _dicomSeriesRepository.AddAsync(series);
foreach (var instanceItem in incommand.InstanceList)
{
var isntance = _mapper.Map<DicomInstance>(instanceItem);
isntance.StudyId = study.Id;
isntance.SeriesId = series.Id;
isntance.TrialId = incommand.TrialId;
isntance.SiteId = incommand.SiteId;
isntance.SubjectId = incommand.SubjectId;
isntance.SubjectVisitId = incommand.SubjectVisitId;
await _dicomInstanceRepository.AddAsync(isntance);
}
}
}
else
{
var studyId = incommand.Study.Id;
var study = await _dicomstudyRepository.FirstOrDefaultAsync(t => t.Id == studyId);
_mapper.Map(incommand.Study, study);
//特殊处理逻辑
SpecialArchiveStudyDeal(study);
await _dicomSeriesRepository.BatchDeleteNoTrackingAsync(t => t.StudyId == incommand.Study.Id);
foreach (var seriesItem in incommand.SeriesList)
{
var series = _mapper.Map<DicomSeries>(seriesItem);
series.Id = IdentifierHelper.CreateGuid(series.StudyInstanceUid, series.SeriesInstanceUid, trialId.ToString());
series.StudyId = study.Id;
series.TrialId = incommand.TrialId;
series.SiteId = incommand.SiteId;
series.SubjectId = incommand.SubjectId;
series.SubjectVisitId = incommand.SubjectVisitId;
await _dicomSeriesRepository.AddAsync(series);
foreach (var instanceItem in incommand.InstanceList)
{
var insntance = _mapper.Map<DicomInstance>(instanceItem);
insntance.Id= IdentifierHelper.CreateGuid(insntance.StudyInstanceUid, insntance.SeriesInstanceUid, insntance.SopInstanceUid, trialId.ToString());
insntance.StudyId = study.Id;
insntance.SeriesId = series.Id;
insntance.TrialId = incommand.TrialId;
insntance.SiteId = incommand.SiteId;
insntance.SubjectId = incommand.SubjectId;
insntance.SubjectVisitId = incommand.SubjectVisitId;
await _dicomInstanceRepository.AddAsync(insntance);
}
}
// 少了整个序列
//某个序列下少了instance
}
await _dicomstudyRepository.SaveChangesAsync();
return ResponseOutput.Ok();
} }
@ -403,7 +575,7 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
/// 批量验证 检查是否可以上传 并告知原因 /// 批量验证 检查是否可以上传 并告知原因
/// </summary> /// </summary>
[HttpPost] [HttpPost]
public IResponseOutput<List<VerifyStudyUploadResult>> VerifyStudyAllowUpload(VerifyUploadOrReupload verifyInfo) public (List<VerifyStudyUploadResult>, object?) VerifyStudyAllowUpload(VerifyUploadOrReupload verifyInfo)
{ {
var trialInfo = _repository.Where<Trial>().FirstOrDefault(t => t.Id == verifyInfo.TrialId).IfNullThrowException(); var trialInfo = _repository.Where<Trial>().FirstOrDefault(t => t.Id == verifyInfo.TrialId).IfNullThrowException();
@ -445,7 +617,19 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
result.Add(temp); result.Add(temp);
}); });
return ResponseOutput.Ok(result);
// 写入dicom 固定的信息,以及组织路径的信息 以及匿名化的信息
var otherData = GetSaveToDicomInfo(verifyInfo.SubjectVisitId);
var systemAnonymizationList = _repository.Where<SystemAnonymization>(t => t.IsEnable).ToList();
return (result, new
{
DicomStoreInfo = otherData,
AnonymizeFixedList = systemAnonymizationList.Where(t => t.IsFixed).ToList(),
AnonymizeNotFixedList = systemAnonymizationList.Where(t => t.IsFixed == false).ToList()
}
);
} }
@ -498,6 +682,9 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
if (verifyStudyInfo.SubjectId == SubjectId && verifyStudyInfo.SubjectVisitId == currentSubjectVisitId) if (verifyStudyInfo.SubjectId == SubjectId && verifyStudyInfo.SubjectVisitId == currentSubjectVisitId)
{ {
result.AllowReUpload = true; result.AllowReUpload = true;
result.UploadedSeriesList = _repository.Where<DicomSeries>(t => t.StudyId == verifyStudyInfo.Id).Select(t => new UploadedSeries()
{ SeriesInstanceUid = t.SeriesInstanceUid, SOPInstanceUIDList = t.DicomInstanceList.Select(c => c.SopInstanceUid).ToList() }).ToList();
} }
//不是同一个受试者 //不是同一个受试者
else else

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@ -12,6 +12,10 @@ namespace IRaCIS.Core.Application.Service
{ {
public ImageAndDocConfig() public ImageAndDocConfig()
{ {
CreateMap<AddOrUpdateStudyDto, DicomStudy>();
CreateMap<AddOrUpdateSeriesDto, DicomSeries>();
CreateMap<AddInstanceDto, DicomInstance>();
CreateMap<Report, ReportDTO>(); CreateMap<Report, ReportDTO>();
CreateMap<ImageLabel, ImageLabelDTO>(); CreateMap<ImageLabel, ImageLabelDTO>();
CreateMap<DicomSeries, DicomSeriesWithLabelDTO>(); CreateMap<DicomSeries, DicomSeriesWithLabelDTO>();
@ -31,7 +35,6 @@ namespace IRaCIS.Core.Application.Service
.ForMember(d => d.SiteName, u => u.MapFrom(s => s.Site.SiteName)) .ForMember(d => d.SiteName, u => u.MapFrom(s => s.Site.SiteName))
.ForMember(d => d.UploaderFirstName, u => u.MapFrom(s => s.Uploader.FirstName)) .ForMember(d => d.UploaderFirstName, u => u.MapFrom(s => s.Uploader.FirstName))
.ForMember(d => d.UploaderLastName, u => u.MapFrom(s => s.Uploader.LastName)) .ForMember(d => d.UploaderLastName, u => u.MapFrom(s => s.Uploader.LastName))
.ForMember(d => d.StudyStatus, u => u.MapFrom(s => s.Status))
.ForMember(d => d.UploadedTime, u => u.MapFrom(s => s.CreateTime)) .ForMember(d => d.UploadedTime, u => u.MapFrom(s => s.CreateTime))
.ForMember(d => d.DTFCount, u => u.MapFrom(s => s.StudyDTFList.Count())); .ForMember(d => d.DTFCount, u => u.MapFrom(s => s.StudyDTFList.Count()));

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@ -317,6 +317,13 @@ namespace IRaCIS.Core.Application.Contracts
public class UploadedSeries
{
public string SeriesInstanceUid { get; set; }
public List<string> SOPInstanceUIDList { get; set; }
}
public class VerifyStudyUploadResult public class VerifyStudyUploadResult
{ {
@ -330,6 +337,8 @@ namespace IRaCIS.Core.Application.Contracts
public string ErrorMesseage { get; set; } = String.Empty; public string ErrorMesseage { get; set; } = String.Empty;
public List<UploadedSeries> UploadedSeriesList { get; set;} = new List<UploadedSeries>();
} }
public class VerifyUploadOrReupload public class VerifyUploadOrReupload

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@ -8,6 +8,8 @@ using Microsoft.AspNetCore.Mvc;
using Microsoft.Extensions.Caching.Distributed; using Microsoft.Extensions.Caching.Distributed;
using Microsoft.Extensions.Options; using Microsoft.Extensions.Options;
using System.Linq.Expressions; using System.Linq.Expressions;
using System.Security.Cryptography;
using System.Text;
using System.Text.RegularExpressions; using System.Text.RegularExpressions;
@ -45,14 +47,14 @@ namespace IRaCIS.Application.Services
public async Task<string> Get() public async Task<string> Get()
{ {
Expression<Func<VisitTask, bool>> visitTaskLambda = x => x.TrialId == Guid.Empty && x.SubjectId == Guid.Empty && x.TrialReadingCriterionId == Guid.Empty; //Expression<Func<VisitTask, bool>> visitTaskLambda = x => x.TrialId == Guid.Empty && x.SubjectId == Guid.Empty && x.TrialReadingCriterionId == Guid.Empty;
var visitTaskIdQueryable = _visitTaskRepositoryy.Where(visitTaskLambda).Where(t => t.Subject.SubjectVisitTaskList.AsQueryable().Where(visitTaskLambda).Any(c => c.IsNeedClinicalDataSign == true && c.IsClinicalDataSign == false && c.VisitTaskNum < t.VisitTaskNum)).Select(t => t.Id); //var visitTaskIdQueryable = _visitTaskRepositoryy.Where(visitTaskLambda).Where(t => t.Subject.SubjectVisitTaskList.AsQueryable().Where(visitTaskLambda).Any(c => c.IsNeedClinicalDataSign == true && c.IsClinicalDataSign == false && c.VisitTaskNum < t.VisitTaskNum)).Select(t => t.Id);
await _visitTaskRepositoryy.BatchUpdateNoTrackingAsync(t => visitTaskIdQueryable.Contains(t.Id), u => new VisitTask() //await _visitTaskRepositoryy.BatchUpdateNoTrackingAsync(t => visitTaskIdQueryable.Contains(t.Id), u => new VisitTask()
{ //{
IsFrontTaskNeedSignButNotSign = true // IsFrontTaskNeedSignButNotSign = true
}); //});
//var a = ((Decimal)1.00).ToString().TrimEnd(new char[] { '.', '0' }); //var a = ((Decimal)1.00).ToString().TrimEnd(new char[] { '.', '0' });
@ -117,10 +119,10 @@ namespace IRaCIS.Application.Services
//await _visitTaskRepositoryy.UpdatePartialFromQueryAsync( Guid.Parse("78360000-3E2C-0016-9B53-08DA6A002040"), c => new VisitTask() { UpdateTime = DateTime.Now.AddMinutes(1) }); //await _visitTaskRepositoryy.UpdatePartialFromQueryAsync( Guid.Parse("78360000-3E2C-0016-9B53-08DA6A002040"), c => new VisitTask() { UpdateTime = DateTime.Now.AddMinutes(1) });
var a = _userInfo.IsTestUser; //var a = _userInfo.IsTestUser;
var list1 = await _repository.Where<Dictionary>().Select(t => t.TranslateValue(t.Value, t.ValueCN, true)).ToListAsync(); //var list1 = await _repository.Where<Dictionary>().Select(t => t.TranslateValue(t.Value, t.ValueCN, true)).ToListAsync();
var list2 = await _repository.Where<Dictionary>().Select(t => t.TranslateValue(t.Value, t.ValueCN, false)).ToListAsync(); //var list2 = await _repository.Where<Dictionary>().Select(t => t.TranslateValue(t.Value, t.ValueCN, false)).ToListAsync();
await _repository.SaveChangesAsync(); await _repository.SaveChangesAsync();
return _userInfo.LocalIp; return _userInfo.LocalIp;
@ -156,7 +158,11 @@ namespace IRaCIS.Application.Services
[AllowAnonymous] [AllowAnonymous]
public async Task<object> GetEnvironmentName([FromServices] IWebHostEnvironment env) public async Task<object> GetEnvironmentName([FromServices] IWebHostEnvironment env)
{ {
var a = IdentifierHelper.CreateGuid("123456");
var k = MD5.Create().ComputeHash(Encoding.UTF8.GetBytes("123456"));
var c = MD5Helper.Md5("123456");
//update DicomInstance set Path = '/IRaCISData/TrialData/' + cast(DicomInstance.TrialId as varchar) + '/' + DicomInstance.SiteId + '/' + DicomInstance.SubjectId + '/' + DicomInstance.SubjectVisitId + '/Dicom/' + DicomInstance.StudyId + '/' + DicomInstance.Id + '.dcm' //update DicomInstance set Path = '/IRaCISData/TrialData/' + cast(DicomInstance.TrialId as varchar) + '/' + DicomInstance.SiteId + '/' + DicomInstance.SubjectId + '/' + DicomInstance.SubjectVisitId + '/Dicom/' + DicomInstance.StudyId + '/' + DicomInstance.Id + '.dcm'

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@ -42,6 +42,7 @@ namespace IRaCIS.Core.Domain.Models
public Guid SubjectId { get; set; } public Guid SubjectId { get; set; }
public Guid SubjectVisitId { get; set; } public Guid SubjectVisitId { get; set; }
public bool Anonymize { get; set; } public bool Anonymize { get; set; }
public string Path { get; set; }
public Guid CreateUserId { get; set; } public Guid CreateUserId { get; set; }
public DateTime CreateTime { get; set; } = DateTime.Now; public DateTime CreateTime { get; set; } = DateTime.Now;
@ -49,6 +50,5 @@ namespace IRaCIS.Core.Domain.Models
public DateTime UpdateTime { get; set; } = DateTime.Now; public DateTime UpdateTime { get; set; } = DateTime.Now;
public string Path { get; set; }
} }
} }

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@ -31,9 +31,6 @@ namespace IRaCIS.Core.Domain.Models
public int InstanceCount { get; set; } public int InstanceCount { get; set; }
public string SliceThickness { get; set; } public string SliceThickness { get; set; }
public string ImagePositionPatient { get; set; } public string ImagePositionPatient { get; set; }
public string ImageOrientationPatient { get; set; } public string ImageOrientationPatient { get; set; }
public string BodyPartExamined { get; set; } public string BodyPartExamined { get; set; }
@ -41,19 +38,18 @@ namespace IRaCIS.Core.Domain.Models
public string ProtocolName { get; set; } public string ProtocolName { get; set; }
public string ImagerPixelSpacing { get; set; } public string ImagerPixelSpacing { get; set; }
public string AcquisitionTime { get; set; } = string.Empty; public string AcquisitionTime { get; set; } = string.Empty;
public string AcquisitionNumber { get; set; } = string.Empty; public string AcquisitionNumber { get; set; } = string.Empty;
public string TriggerTime { get; set; } = string.Empty; public string TriggerTime { get; set; } = string.Empty;
public Guid TrialId { get; set; } public Guid TrialId { get; set; }
public Guid SiteId { get; set; } public Guid SiteId { get; set; }
public Guid SubjectId { get; set; } public Guid SubjectId { get; set; }
public Guid SubjectVisitId { get; set; } public Guid SubjectVisitId { get; set; }
public string BodyPartForEdit { get; set; } = string.Empty;
public Guid CreateUserId { get; set; } public Guid CreateUserId { get; set; }
public DateTime CreateTime { get; set; } = DateTime.Now; public DateTime CreateTime { get; set; } = DateTime.Now;
public Guid UpdateUserId { get; set; } public Guid UpdateUserId { get; set; }
@ -65,6 +61,5 @@ namespace IRaCIS.Core.Domain.Models
public bool IsDeleted {get;set;} public bool IsDeleted {get;set;}
public bool IsReading { get; set; } = true; public bool IsReading { get; set; } = true;
public string BodyPartForEdit { get; set; } = string.Empty;
} }
} }

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@ -37,8 +37,6 @@ namespace IRaCIS.Core.Domain.Models
public string StudyCode { get; set; } = string.Empty; public string StudyCode { get; set; } = string.Empty;
public int Status { get; set; } = 1;
public string StudyInstanceUid { get; set; } = string.Empty; public string StudyInstanceUid { get; set; } = string.Empty;
public DateTime? StudyTime { get; set; } public DateTime? StudyTime { get; set; }
public string Modalities { get; set; } = string.Empty; public string Modalities { get; set; } = string.Empty;
@ -47,7 +45,6 @@ namespace IRaCIS.Core.Domain.Models
public int SeriesCount { get; set; } = 0; public int SeriesCount { get; set; } = 0;
public int InstanceCount { get; set; } = 0; public int InstanceCount { get; set; } = 0;
//public bool SoftDelete { get; set; } = false;
public string InstitutionName { get; set; } = string.Empty; public string InstitutionName { get; set; } = string.Empty;
public string PatientId { get; set; } = string.Empty; public string PatientId { get; set; } = string.Empty;
@ -62,13 +59,25 @@ namespace IRaCIS.Core.Domain.Models
public string AcquisitionNumber { get; set; } = string.Empty; public string AcquisitionNumber { get; set; } = string.Empty;
public string TriggerTime { get; set; } = string.Empty; public string TriggerTime { get; set; } = string.Empty;
public string BodyPartExamined { get; set; } = string.Empty;
public string BodyPartForEdit { get; set; } = string.Empty;
public string ModalityForEdit { get; set; } = string.Empty;
//0 未知 1 单重 2 双重 //0 未知 1 单重 2 双重
public bool IsDoubleReview { get; set; } public bool IsDoubleReview { get; set; }
public string Comment { get; set; } = string.Empty;//上传的时候的 [JsonIgnore]
[ForeignKey("SubjectId")]
public Subject Subject { get; set; }
[JsonIgnore]
[ForeignKey("SubjectVisitId")]
public SubjectVisit SubjectVisit { get; set; }
public string BodyPartExamined { get; set; } = string.Empty;
public Guid UpdateUserId { get; set; } public Guid UpdateUserId { get; set; }
public DateTime UpdateTime { get; set; } = DateTime.Now; public DateTime UpdateTime { get; set; } = DateTime.Now;
public Guid CreateUserId { get; set; } public Guid CreateUserId { get; set; }
@ -78,34 +87,7 @@ namespace IRaCIS.Core.Domain.Models
[ForeignKey("CreateUserId")] [ForeignKey("CreateUserId")]
public User Uploader { get; set; } public User Uploader { get; set; }
//public DateTime? UploadedTime { get; set; }
//public string Uploader { get; set; } = string.Empty;
public DateTime? DeadlineTime { get; set; }
public string QAComment { get; set; } = string.Empty;
public string BodyPartForEdit { get; set; } = string.Empty;
public string ModalityForEdit { get; set; } = string.Empty;
public bool CheckPassed { get; set; }
public string CheckResult { get; set; }=string.Empty;
[JsonIgnore]
[ForeignKey("SubjectId")]
public Subject Subject { get; set; }
[JsonIgnore]
[ForeignKey("SubjectVisitId")]
public SubjectVisit SubjectVisit { get; set; }
//软删除 //软删除
public bool IsDeleted { get; set; } public bool IsDeleted { get; set; }

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@ -239,7 +239,7 @@ namespace IRaCIS.Core.Domain.Models
//自动 手动生成任务 //自动 手动生成任务
public bool IsAutoCreate { get; set; } public bool IsAutoCreate { get; set; }=true;
#endregion #endregion
/// <summary> /// <summary>