修改ivus影像下载功能
continuous-integration/drone/push Build is passing
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continuous-integration/drone/push Build is passing
Details
parent
899ebf2a30
commit
ef451d82ec
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@ -54,11 +54,11 @@
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},
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"applicationUrl": "http://localhost:6100"
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},
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"IRaCIS.US_IRC": {
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"IRaCIS.US_Uat_IRC": {
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"commandName": "Project",
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"launchBrowser": true,
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"environmentVariables": {
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"ASPNETCORE_ENVIRONMENT": "US_IRC"
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"ASPNETCORE_ENVIRONMENT": "US_Uat_IRC"
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},
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"applicationUrl": "http://localhost:6100"
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}
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@ -23,7 +23,7 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
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{
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public interface IDownloadAndUploadService
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{
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Task PackageAndAnonymizImage(Guid trialId, Guid subjectVisitId, bool isAnonymize = true);
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Task PackageAndAnonymizImage(Guid trialId, Guid subjectVisitId, bool isDicom, bool isAnonymize = true);
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}
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[ApiExplorerSettings(GroupName = "Trial")]
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public class DownloadAndUploadService : BaseService, IDownloadAndUploadService
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@ -108,7 +108,7 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
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await SubejctRandomReadingTaskNameDeal(subjectId, trialReadingCriterionId);
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var query = _repository.Where<VisitTask>(t => t.SubjectId == subjectId && t.TrialReadingCriterionId == trialReadingCriterionId && t.SourceSubjectVisitId != null
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&& t.DoctorUserId == _userInfo.Id && t.TaskState==TaskState.Effect)
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&& t.DoctorUserId == _userInfo.Id && t.TaskState == TaskState.Effect)
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.Select(u => new SubjectImageUploadDTO()
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{
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VisitTaskId = u.Id,
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@ -129,7 +129,7 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
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PackState = u.SourceSubjectVisit.PackState,
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OrginalStudyList = u.SourceSubjectVisit.StudyList
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.Where(t => u.TrialReadingCriterion.IsImageFilter ?("|"+u.TrialReadingCriterion.CriterionModalitys+"|").Contains("|"+t.ModalityForEdit+"|" ) : true)
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.Where(t => u.TrialReadingCriterion.IsImageFilter ? ("|" + u.TrialReadingCriterion.CriterionModalitys + "|").Contains("|" + t.ModalityForEdit + "|") : true)
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.Select(t => new StudyBasicInfo()
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{
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Id = t.Id,
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@ -484,24 +484,38 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
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/// </summary>
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/// <param name="trialId"></param>
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/// <param name="subjectVisitId"></param>
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/// <param name="isDicom"></param>
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/// <param name="isAnonymize"></param>
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/// <returns></returns>
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public async Task<IResponseOutput> RequestPackageAndAnonymizImage(Guid trialId, Guid subjectVisitId, bool isAnonymize = true)
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public async Task<IResponseOutput> RequestPackageAndAnonymizImage(Guid trialId, Guid subjectVisitId, bool isDicom, bool isAnonymize = true)
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{
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var subjectVisit = await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == subjectVisitId);
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if (subjectVisit.PackState == PackState.WaitPack)
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{
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HangfireJobHelper.NotImmediatelyOnceOnlyJob<IDownloadAndUploadService>(t => t.PackageAndAnonymizImage(trialId, subjectVisitId, isAnonymize), TimeSpan.FromSeconds(1));
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var packState = isDicom ? subjectVisit.PackState : subjectVisit.NoDicomPackState;
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if (packState == PackState.WaitPack)
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{
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if (isDicom)
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{
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subjectVisit.PackState = PackState.Packing;
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HangfireJobHelper.NotImmediatelyOnceOnlyJob<IDownloadAndUploadService>(t => t.PackageAndAnonymizImage(trialId, subjectVisitId,true, isAnonymize), TimeSpan.FromSeconds(1));
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}
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else
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{
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subjectVisit.NoDicomPackState = PackState.Packing;
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HangfireJobHelper.NotImmediatelyOnceOnlyJob<IDownloadAndUploadService>(t => t.PackageAndAnonymizImage(trialId, subjectVisitId, false, isAnonymize), TimeSpan.FromSeconds(1));
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}
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await _subjectVisitRepository.SaveChangesAsync();
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}
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return ResponseOutput.Ok(subjectVisit.VisitImageZipPath);
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return ResponseOutput.Ok(isDicom ? subjectVisit.VisitImageZipPath : subjectVisit.VisitNoDicomImageZipPath);
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}
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@ -511,9 +525,10 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
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/// </summary>
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/// <param name="trialId"></param>
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/// <param name="subjectVisitId"></param>
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/// <param name="isDicom"></param>
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/// <param name="isAnonymize"></param>
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/// <returns></returns>
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public async Task PackageAndAnonymizImage(Guid trialId, Guid subjectVisitId, bool isAnonymize = true)
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public async Task PackageAndAnonymizImage(Guid trialId, Guid subjectVisitId, bool isDicom, bool isAnonymize = true)
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{
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var subjectVisit = await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == subjectVisitId);
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@ -557,6 +572,20 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
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})
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})
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}),
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NoneDicomStudyList = sv.NoneDicomStudyList.Select(nd => new
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{
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nd.Modality,
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nd.StudyCode,
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nd.ImageDate,
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FileList = nd.NoneDicomFileList.Select(file => new
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{
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file.FileName,
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file.Path,
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file.FileType
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})
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})
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};
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@ -568,22 +597,26 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
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string tempFolderPath = Path.Combine(Directory.GetCurrentDirectory(), $"DownloadTemp_{NewId.NextGuid()}");
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Directory.CreateDirectory(tempFolderPath);
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//dicom 处理
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if (isDicom)
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{
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// 遍历查询结果
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foreach (var studyInfo in info.StudyList)
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{
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// 遍历 Series
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foreach (var seriesInfo in studyInfo.SeriesList)
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{
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string studyFolderPath = Path.Combine(tempFolderPath, $"{info.SubjectCode}_{info.VisitName}", $"{studyInfo.StudyCode}_{studyInfo.StudyTime?.ToString("yyyy-MM-dd")}_{seriesInfo.Modality}");
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string studyDicomFolderPath = Path.Combine(tempFolderPath, "Dicom", $"{info.SubjectCode}_{info.VisitName}", $"{studyInfo.StudyCode}_{studyInfo.StudyTime?.ToString("yyyy-MM-dd")}_{seriesInfo.Modality}");
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// 创建 影像 文件夹
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Directory.CreateDirectory(studyFolderPath);
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Directory.CreateDirectory(studyDicomFolderPath);
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// 遍历 InstancePathList
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foreach (var instanceInfo in seriesInfo.InstancePathList)
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{
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// 复制文件到相应的文件夹
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string destinationPath = Path.Combine(studyFolderPath, Path.GetFileName(instanceInfo.Path));
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string destinationPath = Path.Combine(studyDicomFolderPath, Path.GetFileName(instanceInfo.Path));
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//下载到当前目录
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await _oSSService.DownLoadFromOSSAsync(instanceInfo.Path, destinationPath);
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@ -652,23 +685,50 @@ namespace IRaCIS.Core.Application.Service.ImageAndDoc
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}
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}
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var zipPath = Path.Combine(Directory.GetCurrentDirectory(), $"{info.SubjectCode}_{info.VisitName}_ImageStudy.zip");
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ZipFile.CreateFromDirectory(tempFolderPath, zipPath);
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var zipDicomPath = Path.Combine(Directory.GetCurrentDirectory(), $"{info.SubjectCode}_{info.VisitName}_ImageStudy_Dicom.zip");
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ZipFile.CreateFromDirectory(Path.Combine(tempFolderPath, "Dicom"), zipDicomPath);
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//上传到Oss
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var relativePath = await _oSSService.UploadToOSSAsync(zipPath, $"download_zip", false);
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var relativeDicomPath = await _oSSService.UploadToOSSAsync(zipDicomPath, $"download_zip", false);
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await _subjectVisitRepository.BatchUpdateNoTrackingAsync(t => t.Id == subjectVisitId, u => new SubjectVisit() { PackState = PackState.Packed, VisitImageZipPath = relativeDicomPath });
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//subjectVisit.PackState = PackState.Packed;
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//subjectVisit.VisitImageZipPath = relativePath;
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//await _subjectVisitRepository.SaveChangesAsync();
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await _subjectVisitRepository.BatchUpdateNoTrackingAsync(t => t.Id == subjectVisitId, u => new SubjectVisit() { PackState = PackState.Packed, VisitImageZipPath = relativePath });
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File.Delete(zipDicomPath);
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}
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else
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{
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//非dicom 处理
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foreach (var noneDicomStudy in info.NoneDicomStudyList)
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{
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string studyNoneDicomFolderPath = Path.Combine(tempFolderPath, "NoneDicom", $"{info.SubjectCode}_{info.VisitName}", $"{noneDicomStudy.StudyCode}_{noneDicomStudy.ImageDate.ToString("yyyy-MM-dd")}_{noneDicomStudy.Modality}");
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Directory.CreateDirectory(studyNoneDicomFolderPath);
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foreach (var file in noneDicomStudy.FileList)
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{
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string destinationPath = Path.Combine(studyNoneDicomFolderPath, Path.GetFileName(file.FileName));
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//下载到当前目录
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await _oSSService.DownLoadFromOSSAsync(file.Path, destinationPath);
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}
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}
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var zipNoneDicomPath = Path.Combine(Directory.GetCurrentDirectory(), $"{info.SubjectCode}_{info.VisitName}_ImageStudy_NoneDicom.zip");
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ZipFile.CreateFromDirectory(Path.Combine(tempFolderPath, "NoneDicom"), zipNoneDicomPath);
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var relativeNoneDicomPath = await _oSSService.UploadToOSSAsync(zipNoneDicomPath, $"download_zip", false);
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File.Delete(zipNoneDicomPath);
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await _subjectVisitRepository.BatchUpdateNoTrackingAsync(t => t.Id == subjectVisitId, u => new SubjectVisit() { PackState = PackState.Packed, VisitNoDicomImageZipPath = relativeNoneDicomPath });
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}
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//清理文件夹
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Directory.Delete(tempFolderPath, true);
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File.Delete(zipPath);
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}
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}
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@ -72,7 +72,7 @@ namespace IRaCIS.Core.Application.Contracts
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public List<TrialSiteUserSurveyView> TrialSiteUserSurveyList { get; set; } = new List<TrialSiteUserSurveyView>();
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public SiteSurveyFiledConfig SiteSurveyFiledConfig { get; set; }
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public TrialExtraConfig SiteSurveyFiledConfig { get; set; }
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}
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public class TrialSiteUserSurveyAllDTO : TrialSiteUserSurveyView
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@ -391,9 +391,9 @@ namespace IRaCIS.Core.Application.Contracts
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var result = await _trialSiteSurveyRepository.Where(t => t.Id == trialSiteSurveyId && t.TrialId == trialId).IgnoreQueryFilters()
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.ProjectTo<LoginReturnDTO>(_mapper.ConfigurationProvider, new { isEn_Us = _userInfo.IsEn_Us }).FirstOrDefaultAsync().IfNullThrowException();
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var siteSurveryConfig = _trialSiteSurveyRepository.Where(t => t.Id == trialSiteSurveyId).Select(t => t.Trial.SiteSurveyConfigJsonStr).FirstOrDefault()??string.Empty;
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var siteSurveryConfig = _trialSiteSurveyRepository.Where(t => t.Id == trialSiteSurveyId).Select(t => t.Trial.TrialExtraConfigJsonStr).FirstOrDefault()??string.Empty;
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result.SiteSurveyFiledConfig = JsonConvert.DeserializeObject<SiteSurveyFiledConfig>(siteSurveryConfig) ?? new SiteSurveyFiledConfig();
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result.SiteSurveyFiledConfig = JsonConvert.DeserializeObject<TrialExtraConfig>(siteSurveryConfig) ?? new TrialExtraConfig();
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return result;
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}
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@ -21,6 +21,7 @@ using DocumentFormat.OpenXml.Office.CustomUI;
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using IRaCIS.Core.Domain.Models;
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using IRaCIS.Application.Contracts;
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using SixLabors.ImageSharp.Formats.Tiff.Compression.Decompressors;
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using Newtonsoft.Json;
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namespace IRaCIS.Core.Application
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{
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@ -604,7 +605,7 @@ namespace IRaCIS.Core.Application
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await _readingQuestionCriterionTrialRepository.UpdatePartialFromQueryAsync(inDto.TrialReadingCriterionId, x => new ReadingQuestionCriterionTrial()
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{
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IsImageFilter=inDto.IsImageFilter,
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IsImageFilter = inDto.IsImageFilter,
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ImageDownloadEnum = inDto.ImageDownloadEnum,
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ImageUploadEnum = inDto.ImageUploadEnum,
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CriterionModalitys = inDto.CriterionModalitys,
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return ResponseOutput.Ok(cro.Id.ToString(), ApiResponseCodeEnum.NeedTips);
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}
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public async Task<TrialExtraConfig> GetTrialExtralConfig(Guid trialId)
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{
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var extralConfig = _trialRepository.Where(t => t.Id == trialId).Select(t => t.TrialExtraConfigJsonStr).FirstOrDefault() ?? string.Empty;
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return JsonConvert.DeserializeObject<TrialExtraConfig>(extralConfig) ?? new TrialExtraConfig();
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}
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}
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}
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@ -41,11 +41,26 @@ namespace IRaCIS.Core.Domain.Share
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}
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public class SiteSurveyFiledConfig
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public class TrialExtraConfig
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{
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public List<string> NotShowFieldList { get; set; }=new List<string>();
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#region MyRegion
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//QC质控
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public bool IsSupportQCDownloadImage { get; set; } = false;
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#endregion
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#region 中心调研
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public List<string> NotShowFieldList { get; set; } = new List<string>();
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public List<SiteSurveyModifyFiled> ModifyFiledList { get; set; } = new List<SiteSurveyModifyFiled>();
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#endregion
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public List<SiteSurveyModifyFiled> ModifyFiledList { get; set; }=new List<SiteSurveyModifyFiled>();
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}
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@ -182,9 +182,8 @@ namespace IRaCIS.Core.Domain.Models
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//public List<SiteSurveyFiledConfig>
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public string SiteSurveyConfigJsonStr { get; set; } = string.Empty;
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public string TrialExtraConfigJsonStr { get; set; } = string.Empty;
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public bool VisitPlanConfirmed { get; set; }
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@ -248,6 +248,10 @@ namespace IRaCIS.Core.Domain.Models
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public string VisitImageZipPath { get; set; } = string.Empty;
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public PackState PackState { get; set; }
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public PackState NoDicomPackState { get; set; }
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public string VisitNoDicomImageZipPath { get; set;} = string.Empty;
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}
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/// <summary>
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/// 影像下载打包状态
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