2140 lines
87 KiB
C#
2140 lines
87 KiB
C#
using Hangfire;
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using IRaCIS.Core.Application.MediatR.CommandAndQueries;
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using IRaCIS.Core.Application.BackGroundJob;
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using IRaCIS.Core.Application.Contracts;
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using IRaCIS.Core.Application.Contracts.DTO;
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using IRaCIS.Core.Application.Filter;
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using IRaCIS.Core.Domain.Share;
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using MediatR;
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using Microsoft.AspNetCore.Mvc;
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using System.Net.Http.Headers;
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using Microsoft.AspNetCore.Http;
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using MiniExcelLibs;
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using ExcelDataReader;
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using System.Text;
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using System.Data;
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using Microsoft.AspNetCore.Authorization;
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using WinSCP;
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using Magicodes.ExporterAndImporter.Excel;
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using Newtonsoft.Json;
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using IRaCIS.Core.Application.Service.Inspection.Interface;
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using IRaCIS.Core.Infrastructure;
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using IRaCIS.Core.Application.Service.Inspection.DTO;
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using Nito.AsyncEx;
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using IRaCIS.Application.Interfaces;
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using IRaCIS.Core.Domain.Common;
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namespace IRaCIS.Core.Application.Image.QA
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{
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[ApiExplorerSettings(GroupName = "Image")]
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public class QCOperationService : BaseService, IQCOperationService
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{
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private readonly DicomFileStoreHelper _dicomFileStoreHelper;
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private readonly IRepository<SubjectVisit> _subjectVisitRepository;
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private readonly IRepository<QCChallenge> _qcChallengeRepository;
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private readonly IRepository<DicomStudy> _dicomStudyRepository;
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private readonly IRepository<Dictionary> _dictionaryrepository;
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private readonly IRepository<Subject> _subjectRepository;
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private readonly IRepository<Trial> _trialRepository;
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private readonly IMediator _mediator;
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private readonly IInspectionService _inspectionService;
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private readonly IDictionaryService _dictionaryService;
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private object _locker = new object();
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private readonly AsyncLock _mutex = new AsyncLock();
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public QCOperationService(DicomFileStoreHelper dicomFileStoreHelper, IRepository<SubjectVisit> subjectVisitRepository,
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IRepository<QCChallenge> qcChallengeRepository,
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IRepository<Trial> trialRepository,
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IMediator mediator,
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IInspectionService inspectionService,
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IDictionaryService dictionaryService,
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IRepository<DicomStudy> dicomStudyRepository,
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IRepository<Dictionary> dictionaryrepository,
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IRepository<Subject> subjectRepository
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)
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{
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_dicomFileStoreHelper = dicomFileStoreHelper;
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_subjectVisitRepository = subjectVisitRepository;
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_qcChallengeRepository = qcChallengeRepository;
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_dicomStudyRepository = dicomStudyRepository;
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this._dictionaryrepository = dictionaryrepository;
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this._subjectRepository = subjectRepository;
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_mediator = mediator;
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_trialRepository = trialRepository;
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_inspectionService = inspectionService;
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this._dictionaryService = dictionaryService;
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}
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#region QC质疑 以及回复 关闭
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[HttpPost("{trialId:guid}/{subjectVisitId:guid}/{currentQCType:int}")]
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[TypeFilter(typeof(TrialResourceFilter))]
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public async Task<IResponseOutput> VerifyQCCanAddChallenge(Guid subjectVisitId, [FromRoute] CurrentQC currentQCType)
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{
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VerifyIsCanQC(null, subjectVisitId);
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if (!await _repository.AnyAsync<TrialQCQuestionAnswer>(t => t.SubjectVisitId == subjectVisitId && t.CurrentQCEnum == currentQCType))
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{
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return ResponseOutput.NotOk("请先核查图像，保存审核问题后，再发质疑。");
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}
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return ResponseOutput.Ok();
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}
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/// <summary>
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/// 添加和更新质疑
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/// </summary>
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/// <param name="qaQuestionCommand"></param>
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/// <param name="trialId"></param>
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/// <param name="trialQCProcess"></param>
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/// <param name="currentQCType"></param>
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/// <returns></returns>
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[HttpPost("{trialId:guid}/{trialQCProcess:int}/{currentQCType:int}")]
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[TypeFilter(typeof(TrialResourceFilter))]
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[Authorize(Policy = "ImageQCPolicy")]
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public async Task<QCChallenge> AddOrUpdateQCChallenge(QCChallengeCommand qaQuestionCommand, Guid trialId, [FromRoute] TrialQCProcess trialQCProcess, [FromRoute] CurrentQC currentQCType)
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{
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VerifyIsCanQC(null, qaQuestionCommand.SubjectVisitId);
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if (qaQuestionCommand.Id == null)
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{
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if (await _qcChallengeRepository.AnyAsync(t => t.IsClosed == false && t.SubjectVisitId == qaQuestionCommand.SubjectVisitId && t.ReuploadEnum == QCChanllengeReuploadEnum.QCAgreeUpload))
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{
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throw new BusinessValidationFailedException("当前访视有未关闭的 同意CRC上传的质疑，不允许再次添加质疑");
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}
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var trialConfig = (await _trialRepository.Where(t => t.Id == trialId).Select(t => new { TrialId = t.Id, t.QCProcessEnum, t.IsImageConsistencyVerification }).FirstOrDefaultAsync()).IfNullThrowException();
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using (await _mutex.LockAsync())
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{
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//获取编号
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var code = _qcChallengeRepository.Where(t => t.TrialId == trialId).Select(t => t.ChallengeCode).DefaultIfEmpty().Max();
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var qcChallenge = _mapper.Map<QCChallenge>(qaQuestionCommand);
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qcChallenge.QCProcessEnum = trialConfig.QCProcessEnum;
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qcChallenge.CurrentQCEnum = currentQCType;
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qcChallenge.TrialId = trialId;
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qcChallenge.ChallengeCode = code + 1;
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qcChallenge.UserTypeEnum = (UserTypeEnum)_userInfo.UserTypeEnumInt;
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qcChallenge = await _qcChallengeRepository.AddAsync(qcChallenge, true);
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return qcChallenge;
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}
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}
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else
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{
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return await _repository.UpdateFromDTOAsync<QCChallenge, QCChallengeCommand>(qaQuestionCommand, true);
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}
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}
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/// <summary>
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/// 关闭质疑，什么情况下允许？
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/// </summary>
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/// <param name="qcChallengeId"></param>
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/// <param name="subjectVisitId"></param>
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/// <param name="closeEnum"></param>
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/// <param name="closeReason"></param>
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/// <returns></returns>
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[HttpPost("{trialId:guid}/{qcChallengeId:guid}/{subjectVisitId:guid}/{closeEnum}/{closeReason}")]
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[TypeFilter(typeof(TrialResourceFilter))]
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[UnitOfWork]
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//[Authorize(Policy = "ImageQCPolicy")]
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public async Task<IResponseOutput> CloseQCChallenge(Guid qcChallengeId, Guid subjectVisitId, [FromRoute] QCChallengeCloseEnum closeEnum, [FromRoute] string closeReason)
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{
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if (_userInfo.UserTypeEnumInt == (int)UserTypeEnum.IQC)
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{
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VerifyIsCanQC(null, subjectVisitId);
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}
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var dbQCChallenge = (await _qcChallengeRepository.FirstOrDefaultAsync(t => t.Id == qcChallengeId)).IfNullThrowException();
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if (dbQCChallenge.ReuploadEnum == QCChanllengeReuploadEnum.CRCRequestReupload || dbQCChallenge.ReuploadEnum == QCChanllengeReuploadEnum.QCAgreeUpload)
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{
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throw new BusinessValidationFailedException("CRC申请重传的/QC同意重传的质疑，在CRC设置重传完成前不允许关闭质疑");
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}
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#region 之前
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dbQCChallenge.CloseResonEnum = closeEnum;
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dbQCChallenge.IsClosed = true;
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dbQCChallenge.ClosedTime = DateTime.Now;
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dbQCChallenge.DialogList.Add(new QCChallengeDialog()
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{
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SubjectVisitId = dbQCChallenge.SubjectVisitId,
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UserTypeEnum = (UserTypeEnum)_userInfo.UserTypeEnumInt,
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QCChallengeId = dbQCChallenge.Id,
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TalkContent = "关闭原因: " + closeReason
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});
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var success = await _qcChallengeRepository.SaveChangesAsync();
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#endregion
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return ResponseOutput.Result(success);
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#region 对话实体不会加入
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//dbQCChallenge.DialogList.Add(new QCChallengeDialog()
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//{
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// SubjectVisitId = dbQCChallenge.SubjectVisitId,
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// UserTypeEnum = (UserTypeEnum)_userInfo.UserTypeEnumInt,
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// QCChallengeId = dbQCChallenge.Id,
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// TalkContent = "关闭原因: " + closeReason
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//});
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//var success = await _qcChallengeRepository.PartialUpdateAsync(dbQCChallenge, u => new QCChallenge()
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//{
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// CloseResonEnum = closeEnum,
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// IsClosed = true,
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// ClosedTime = DateTime.Now,
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//}, true);
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#endregion
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}
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/// <summary>
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/// 删除QC质疑记录
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/// </summary>
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/// <returns></returns>
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[HttpDelete("{qcChallengeId:guid}/{trialId:guid}")]
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[TypeFilter(typeof(TrialResourceFilter))]
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[Authorize(Policy = "ImageQCPolicy")]
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public async Task<IResponseOutput> DeleteQCChallenge(Guid qcChallengeId)
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{
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if (await _repository.AnyAsync<QCChallengeDialog>(t => t.QCChallengeId == qcChallengeId))
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{
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ResponseOutput.NotOk("this QC Challenge Has been replied ");
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}
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var qaRecord = await _qcChallengeRepository.FirstOrDefaultAsync(t => t.Id == qcChallengeId);
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if (qaRecord == null) return Null404NotFound(qaRecord);
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await _qcChallengeRepository.DeleteAsync(qaRecord);
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var success1 = await _repository.SaveChangesAsync();
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return ResponseOutput.Result(success1 /*|| success2 || success3*/);
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}
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/// <summary>
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/// 针对 某条QC质疑 添加回复
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/// </summary>
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/// <param name="qaDialogCommand"></param>
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/// <returns></returns>
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[HttpPost("{trialId:guid}")]
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[TypeFilter(typeof(TrialResourceFilter))]
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[Authorize(Policy = "ImageQCPolicy")]
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public async Task<IResponseOutput> AddQCChallengeReply(QADialogCommand qaDialogCommand)
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{
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var qaReply = _mapper.Map<QCChallengeDialog>(qaDialogCommand);
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await _repository.AddAsync(qaReply);
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qaReply.UserTypeEnum = (UserTypeEnum)_userInfo.UserTypeEnumInt;
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var dbQCChallenge = (await _repository.FirstOrDefaultAsync<QCChallenge>(t => t.Id == qaDialogCommand.QCChallengeId)).IfNullThrowException();
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dbQCChallenge.LatestMsgTime = DateTime.Now;
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dbQCChallenge.LatestReplyUserId = _userInfo.Id;
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var success = await _repository.SaveChangesAsync();
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return ResponseOutput.Result(success, qaReply);
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}
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#endregion
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#region 一致性核查
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/// <summary>
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/// 一致性核查 质疑的添加/回复
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/// </summary>
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/// <param name="checkDialogCommand"></param>
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/// <returns></returns>
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[HttpPost("{trialId:guid}")]
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[TypeFilter(typeof(TrialResourceFilter))]
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[Authorize(Policy = "ImageCheckPolicy")]
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public async Task<IResponseOutput<CheckChallengeDialog>> AddCheckChallengeReply(CheckChallengeDialogCommand checkDialogCommand)
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{
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//修改一致性核查 质疑状态
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var sv = (await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == checkDialogCommand.SubjectVisitId)).IfNullThrowException();
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var qaReply = _mapper.Map<CheckChallengeDialog>(checkDialogCommand);
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qaReply.UserTypeEnum = (UserTypeEnum)_userInfo.UserTypeEnumInt;
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await _repository.AddAsync(qaReply);
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if (_userInfo.UserTypeEnumInt == (int)UserTypeEnum.ClinicalResearchCoordinator)
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{
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sv.CheckChallengeState = CheckChanllengeTypeEnum.CRCWaitPMReply;
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}
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else if (_userInfo.UserTypeEnumInt == (int)UserTypeEnum.ProjectManager)
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{
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sv.CheckChallengeState = CheckChanllengeTypeEnum.PMWaitCRCReply;
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}
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else
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{
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throw new BusinessValidationFailedException("一致性核查对话操作用户 只允许 CRC/PM");
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}
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var success = await _repository.SaveChangesAsync();
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return ResponseOutput.Result(success, qaReply);
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}
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/// <summary>
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/// 关闭 一致性核查质疑
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/// </summary>
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/// <returns></returns>
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[HttpPut("{trialId:guid}/{subjectVisitId:guid}")]
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[TypeFilter(typeof(TrialResourceFilter))]
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public async Task<IResponseOutput> CloseCheckChallenge(CloseCheckChallengeDto input)
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{
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var sv = (await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == input.subjectVisitId)).IfNullThrowException();
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if (sv.RequestBackState == RequestBackStateEnum.PM_AgressBack)
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{
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ResponseOutput.NotOk("执行一致性核查的访视 不允许关闭质疑!");
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}
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sv.CloseTheReason = input.CloseCheckChallenge;
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sv.CheckChallengeState = CheckChanllengeTypeEnum.Closed;
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await _repository.SaveChangesAsync();
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return ResponseOutput.Ok(sv);
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}
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/// <summary>
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/// 手动设置一致性核查通过
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/// </summary>
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/// <returns></returns>
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[HttpPut("{trialId:guid}/{signId:guid}/{subjectVisitId:guid}")]
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[TypeFilter(typeof(TrialResourceFilter))]
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public async Task<IResponseOutput> SetCheckPass(SetCheckPassDt data)
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{
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if (_userInfo.UserTypeEnumInt != (int)UserTypeEnum.ProjectManager)
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{
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ResponseOutput.NotOk("只允许PM 手动设置一致性核查通过");
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}
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var sv = await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == data.Id);
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if (sv == null) return Null404NotFound(sv);
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if (sv.RequestBackState == RequestBackStateEnum.PM_AgressBack)
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{
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ResponseOutput.NotOk("当前是PM同意回退,不允许设置一致性核查通过");
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}
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if (sv.CheckChallengeState != CheckChanllengeTypeEnum.Closed && sv.AuditState == AuditStateEnum.QCPassed)
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{
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ResponseOutput.NotOk("一致性核查质疑未关闭/审核状态不是通过，不允许设置一致性核查通过");
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}
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sv.CheckState = CheckStateEnum.CVPassed;
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sv.ForwardState = ForwardStateEnum.ToForward;
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sv.ManualPassReason = data.ManualPassReason;
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sv.CheckPassedTime = DateTime.Now;
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await _repository.SaveChangesAsync();
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//var signSuccess = await _repository.UpdateFromQueryAsync<TrialSign>(t => t.Id == signId, u => new TrialSign() { IsCompleted = true });
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return ResponseOutput.Result(true);
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}
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/// <summary>
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/// CRC 请求回退
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/// </summary>
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/// <param name="subjectVisitId"></param>
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/// <returns></returns>
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[HttpPut("{trialId:guid}/{subjectVisitId:guid}")]
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[TypeFilter(typeof(TrialResourceFilter))]
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public async Task<IResponseOutput> CRCRequstCheckBack(Guid subjectVisitId)
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{
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var sv = await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == subjectVisitId);
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if (sv == null) return Null404NotFound(sv);
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if (sv.CheckState == CheckStateEnum.CVPassed)
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{
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return ResponseOutput.NotOk("核查通过的数据不允许申请回退");
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}
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await _subjectVisitRepository.BatchUpdateNoTrackingAsync(t => t.Id == subjectVisitId, u => new SubjectVisit() { RequestBackState = RequestBackStateEnum.CRC_RequestBack });
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return ResponseOutput.Ok();
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}
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/// <summary>
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/// 一致性核查 回退 对话记录不清除 只允许PM回退
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/// </summary>
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/// <returns></returns>
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[HttpPut("{trialId:guid}/{signId:guid}/{subjectVisitId:guid}")]
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[TypeFilter(typeof(TrialResourceFilter))]
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public async Task<IResponseOutput> CheckBack(Guid subjectVisitId)
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{
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if (_userInfo.UserTypeEnumInt != (int)UserTypeEnum.ProjectManager)
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{
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return ResponseOutput.NotOk(" 只允许PM 回退!");
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}
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var sv = await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == subjectVisitId);
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if (sv == null) return Null404NotFound(sv);
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|
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if (sv.CheckState == CheckStateEnum.CVPassed || sv.CheckState == CheckStateEnum.ToCheck)
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{
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return ResponseOutput.NotOk("待核查/核查通过的数据不允许回退");
|
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}
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//sv.CheckChallengeState = (int)CheckChanllengeTypeEnum.None;
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//sv.CheckState = CheckStateEnum.None;
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//sv.ChallengeState = (int)ChallengeStateEnum.No;
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sv.AuditState = AuditStateEnum.None;
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sv.SubmitState = SubmitStateEnum.ToSubmit;
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//回退后，回退状态恢复
|
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sv.RequestBackState = RequestBackStateEnum.NotRequest;
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sv.IsCheckBack = true;
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sv.CheckState = CheckStateEnum.None;
|
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sv.CheckChallengeState = CheckChanllengeTypeEnum.None;
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sv.SVENDTC = null;
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sv.SVSTDTC = null;
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sv.PreliminaryAuditTime = null;
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sv.SubmitTime = null;
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sv.ReviewAuditTime = null;
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sv.CurrentActionUserExpireTime = null;
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sv.IsTake = false;
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sv.CurrentActionUserId = null;
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sv.PreliminaryAuditUserId = null;
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sv.ReviewAuditUserId = null;
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//var success1 = _studyRepository.Delete(t => t.SubjectVisitId == subjectVisitId);
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//var succeess2 = _instanceRepository.Delete(t => t.SubjectVisitId == subjectVisitId);
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//var success3 = _seriesRepository.Delete(t => t.SubjectVisitId == subjectVisitId);
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//_qcChallengeRepository.Delete(t => t.SubjectVisitId == subjectVisitId);
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//_qcChallengeDialogRepository.Delete(t => t.SubjectVisitId == subjectVisitId);
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//_checkChallengeDialogRepository.Delete(t => t.SubjectVisitId == subjectVisitId);
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await _repository.AddAsync(new CheckChallengeDialog() { SubjectVisitId = subjectVisitId, TalkContent = "PM执行了一致性核查回退", UserTypeEnum = (UserTypeEnum)_userInfo.UserTypeEnumInt });
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await _repository.BatchDeleteAsync<TrialQCQuestionAnswer>(t => t.SubjectVisitId == subjectVisitId);
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var success = await _repository.SaveChangesAsync();
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// var signSuccess = await _repository.UpdateFromQueryAsync<TrialSign>(t => t.Id == signId, u => new TrialSign() { IsCompleted = true });
|
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return ResponseOutput.Result(success);
|
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|
||
}
|
||
|
||
|
||
/// <summary>
|
||
/// 一致性核查 excel上传 支持三种格式
|
||
/// </summary>
|
||
/// <param name="file"></param>
|
||
/// <param name="trialId"></param>
|
||
/// <returns></returns>
|
||
[HttpPost("{trialId:guid}")]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> UploadVisitCheckExcel(IFormFile file, Guid trialId)
|
||
{
|
||
if (_userInfo.UserTypeEnumInt != (int)UserTypeEnum.ProjectManager)
|
||
{
|
||
return ResponseOutput.NotOk("只允许PM 操作");
|
||
}
|
||
|
||
var rootPath = Directory.GetParent(_hostEnvironment.ContentRootPath.TrimEnd('\\')).IfNullThrowException().FullName;
|
||
|
||
var fileName = ContentDispositionHeaderValue.Parse(file.ContentDisposition).FileName.ToString().Trim('"').ToLower();
|
||
if (!fileName.EndsWith(".xlsx") && !fileName.EndsWith(".csv") && !fileName.EndsWith(".xls"))
|
||
{
|
||
return ResponseOutput.NotOk("只允许Excel、 CSV！");
|
||
}
|
||
|
||
//上传根路径
|
||
string uploadFolderPath = Path.Combine(rootPath, "UploadFile", "Check");
|
||
|
||
if (!Directory.Exists(uploadFolderPath))
|
||
{
|
||
Directory.CreateDirectory(uploadFolderPath);
|
||
}
|
||
|
||
//存放核对表
|
||
var filePath = Path.Combine(uploadFolderPath, DateTime.Now.ToString("yyyy-MM-dd-hh-mm-ss") + fileName);
|
||
using (FileStream fs = System.IO.File.Create(filePath))
|
||
{
|
||
await file.CopyToAsync(fs);
|
||
await fs.FlushAsync();
|
||
}
|
||
|
||
//获取Excel表内容
|
||
var config = new MiniExcelLibs.Csv.CsvConfiguration()
|
||
{
|
||
StreamReaderFunc = (stream) => new StreamReader(stream, Encoding.GetEncoding("gb2312"))
|
||
};
|
||
|
||
var etcCheckList = new List<CheckViewModel>();
|
||
|
||
|
||
|
||
#region MiniExcel 需要自己验证数据格式规范
|
||
|
||
//if (fileName.EndsWith(".csv"))
|
||
//{
|
||
// //因为csv 需要加配置文件 不然都是null
|
||
// etcCheckList = MiniExcel.Query<CheckViewModel>(filePath, null, configuration: config).ToList();
|
||
//}
|
||
//else if (fileName.EndsWith(".xlsx"))
|
||
//{
|
||
//
|
||
|
||
|
||
// etcCheckList = MiniExcel.Query<CheckViewModel>(filePath).ToList();
|
||
//}
|
||
|
||
#endregion
|
||
|
||
//Magicodes 支持自定义特性验证
|
||
if (fileName.EndsWith(".xlsx"))
|
||
{
|
||
var Importer = new ExcelImporter();
|
||
|
||
var import = await Importer.Import<CheckViewModel>(File.OpenRead(filePath));
|
||
|
||
if (import.Exception != null) return ResponseOutput.NotOk(import.Exception.ToString());
|
||
|
||
if (import.RowErrors.Count > 0) return ResponseOutput.NotOk(JsonConvert.SerializeObject(import.RowErrors));
|
||
|
||
if (import.TemplateErrors.Count > 0) return ResponseOutput.NotOk(JsonConvert.SerializeObject(import.TemplateErrors));
|
||
|
||
etcCheckList = import.Data.ToList();
|
||
}
|
||
else if (fileName.EndsWith(".csv"))
|
||
{
|
||
#region 临时方案 MiniExcel读取 然后保存为xlsx 再用 Magicodes验证数据
|
||
|
||
//因为csv 需要加配置文件 不然都是null
|
||
etcCheckList = MiniExcel.Query<CheckViewModel>(filePath, null, configuration: config).ToList();
|
||
|
||
var csVToXlsxPath = Path.Combine(uploadFolderPath, DateTime.Now.ToString("yyyy-MM-dd-hh-mm-ss") + Path.GetFileNameWithoutExtension(fileName) + ".xlsx");
|
||
|
||
await MiniExcel.SaveAsAsync(csVToXlsxPath, etcCheckList, excelType: ExcelType.XLSX);
|
||
|
||
|
||
var Importer = new ExcelImporter();
|
||
|
||
var import = await Importer.Import<CheckViewModel>(File.OpenRead(csVToXlsxPath));
|
||
|
||
if (import.Exception != null) return ResponseOutput.NotOk(import.Exception.ToString());
|
||
|
||
if (import.RowErrors.Count > 0) return ResponseOutput.NotOk(JsonConvert.SerializeObject(import.RowErrors));
|
||
|
||
if (import.TemplateErrors.Count > 0) return ResponseOutput.NotOk(JsonConvert.SerializeObject(import.TemplateErrors));
|
||
|
||
etcCheckList = import.Data.ToList();
|
||
|
||
#endregion
|
||
|
||
|
||
#region 导入组件有问题 excel编码格式
|
||
//var Importer = new CsvImporter();
|
||
|
||
//var import = await Importer.Import<CheckViewModel>(File.OpenRead(filePath));
|
||
|
||
//if (import.Exception != null) return ResponseOutput.NotOk(import.Exception.ToString());
|
||
|
||
//if (import.RowErrors.Count > 0) return ResponseOutput.NotOk(JsonConvert.SerializeObject(import.RowErrors));
|
||
|
||
//if (import.TemplateErrors.Count > 0) return ResponseOutput.NotOk(JsonConvert.SerializeObject(import.TemplateErrors));
|
||
|
||
//etcCheckList = import.Data.ToList();
|
||
#endregion
|
||
|
||
}
|
||
//ExcelReaderFactory 需要自己验证数据 并且从固定列取数据
|
||
else
|
||
{
|
||
//为了支持 xls 引入新的组件库
|
||
using (var stream = System.IO.File.Open(filePath, FileMode.Open, FileAccess.Read))
|
||
{
|
||
// Auto-detect format, supports:
|
||
// - Binary Excel files (2.0-2003 format; *.xls)
|
||
// - OpenXml Excel files (2007 format; *.xlsx, *.xlsb)
|
||
using (var reader = ExcelReaderFactory.CreateReader(stream))
|
||
{
|
||
|
||
// 2. Use the AsDataSet extension method
|
||
var dateset = reader.AsDataSet();
|
||
|
||
foreach (DataRow col in dateset.Tables[0].Rows)
|
||
{
|
||
|
||
etcCheckList.Add(new CheckViewModel()
|
||
{
|
||
SiteCode = col[0].ToString(),
|
||
SubjectCode = col[1].ToString(),
|
||
VisitName = col[2].ToString(),
|
||
StudyDate = col[3].ToString(),
|
||
Modality = col[4].ToString(),
|
||
});
|
||
}
|
||
|
||
etcCheckList.Remove(etcCheckList[0]);
|
||
|
||
// The result of each spreadsheet is in result.Tables
|
||
}
|
||
}
|
||
}
|
||
|
||
|
||
//etcCheckList = etcCheckList.Where(t=>)
|
||
|
||
if (etcCheckList == null || etcCheckList.Count == 0)
|
||
{
|
||
return ResponseOutput.NotOk("请上传规定格式的Excel文件，保证有有效数据！");
|
||
}
|
||
else
|
||
{
|
||
//处理Excel 有时只是清除某些行的数据 读取也会读到数据，只是数据是null 后面处理的时候转为字符串为报错
|
||
etcCheckList.ForEach(t =>
|
||
{
|
||
t.Modality = t.Modality ?? string.Empty;
|
||
t.SiteCode = t.SiteCode ?? string.Empty;
|
||
t.SubjectCode = t.SubjectCode ?? string.Empty;
|
||
t.VisitName = t.VisitName ?? string.Empty;
|
||
t.StudyDate = t.StudyDate ?? string.Empty;
|
||
});
|
||
|
||
var dt = DateTime.Now;
|
||
|
||
etcCheckList = etcCheckList.Where(t => !(t.Modality == string.Empty && t.SiteCode == string.Empty && t.SubjectCode == string.Empty && t.VisitName == string.Empty && t.StudyDate == string.Empty && DateTime.TryParse(t.StudyDate, out dt))).ToList();
|
||
|
||
if (etcCheckList.Count == 0)
|
||
{
|
||
return ResponseOutput.NotOk("请上传规定格式的Excel文件，保证有有效数据！");
|
||
}
|
||
|
||
}
|
||
|
||
await _mediator.Send(new ConsistencyVerificationRequest() { ETCList = etcCheckList, TrialId = trialId });
|
||
|
||
return ResponseOutput.Ok();
|
||
|
||
}
|
||
|
||
#endregion
|
||
|
||
|
||
#region QC 核对问题 操作检查各种操作
|
||
|
||
/// <summary>
|
||
/// 添加或者更新 QC核对问题列表 两个人不能同时操作，就算意外进去了，提交数据，也不会覆盖前一个人数据， 后台已经做好判断
|
||
/// </summary>
|
||
[HttpPost("{trialId:guid}/{subjectVisitId:guid}/{trialQCProcess:int}/{currentQCType:int}")]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> AddOrUpdateQCQuestionAnswerList(QCQuestionAnswerCommand[] qcQuestionAnswerCommands, Guid trialId, Guid subjectVisitId, [FromRoute] TrialQCProcess trialQCProcess, [FromRoute] CurrentQC currentQCType)
|
||
{
|
||
//验证是否能操作
|
||
VerifyIsCanQC(null, subjectVisitId);
|
||
|
||
//更新
|
||
if (qcQuestionAnswerCommands.Any(t => t.Id != null))
|
||
{
|
||
|
||
#region 先删除再添加
|
||
|
||
//await _repository.DeleteFromQueryAsync<TrialQCQuestionAnswer>(t => t.SubjectVisitId == subjectVisitId && t.QCProcessEnum == trialQCProcess && t.CurrentQCEnum == currentQCType);
|
||
|
||
//var addlist = _mapper.Map<List<TrialQCQuestionAnswer>>(qcQuestionAnswerCommands);
|
||
|
||
//addlist.ForEach(t => { t.TrialId = trialId; t.SubjectVisitId = subjectVisitId; t.CurrentQCEnum = currentQCType; t.QCProcessEnum = trialQCProcess; });
|
||
|
||
//await _repository.AddRangeAsync(addlist);
|
||
|
||
#endregion
|
||
|
||
#region 先查询再更新
|
||
|
||
var questionAnswerList = await _repository.Where<TrialQCQuestionAnswer>(t => t.SubjectVisitId == subjectVisitId && t.QCProcessEnum == trialQCProcess && t.CurrentQCEnum == currentQCType, true).ToListAsync();
|
||
|
||
qcQuestionAnswerCommands.ToList().ForEach(t =>
|
||
{
|
||
var temp = questionAnswerList.FirstOrDefault(u => u.Id == t.Id);
|
||
|
||
if (temp != null)
|
||
{
|
||
temp.Answer = t.Answer;
|
||
//temp.ChildAnswer = t.ChildAnswer;
|
||
}
|
||
|
||
});
|
||
|
||
//Automapper 映射有问题 automapper 会把Guid? 类型的null 值转为 guid.Empty 导致映射错误
|
||
//_mapper.Map(qcQuestionAnswerCommands, questionAnswerList);
|
||
#endregion
|
||
|
||
|
||
|
||
return ResponseOutput.Ok(await _repository.SaveChangesAsync());
|
||
}
|
||
else
|
||
{
|
||
var addlist = _mapper.Map<List<TrialQCQuestionAnswer>>(qcQuestionAnswerCommands);
|
||
|
||
addlist.ForEach(t => { t.TrialId = trialId; t.SubjectVisitId = subjectVisitId; t.CurrentQCEnum = currentQCType; t.QCProcessEnum = trialQCProcess; });
|
||
|
||
await _repository.AddRangeAsync(addlist);
|
||
|
||
return ResponseOutput.Result(await _repository.SaveChangesAsync());
|
||
}
|
||
|
||
|
||
}
|
||
|
||
|
||
/// <summary>
|
||
/// 1、设置为不读片，2 设置为读片(取消 先前设置为不读片) 4 设置为删除(数据库记录软删除) 5 恢复为未删除
|
||
/// </summary>
|
||
/// <param name="subjectVisitId"></param>
|
||
/// <param name="studyId"></param>
|
||
/// <param name="seriesId"></param>
|
||
/// <param name="state"></param>
|
||
/// <returns></returns>
|
||
[HttpPut("{trialId:guid}/{subjectVisitId:guid}/{studyId:guid}/{seriesId:guid}/{state:int}")]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> SetSeriesState(Guid subjectVisitId, Guid studyId, Guid seriesId, int state)
|
||
{
|
||
|
||
VerifyIsCanQC(null, subjectVisitId);
|
||
|
||
|
||
var series = await _repository.Where<DicomSeries>(t => t.Id == seriesId, true).IgnoreQueryFilters().FirstOrDefaultAsync();
|
||
|
||
if (series == null) return Null404NotFound(series);
|
||
|
||
if (state == 1)
|
||
{
|
||
series.IsReading = false;
|
||
}
|
||
else if (state == 2)
|
||
{
|
||
series.IsReading = true;
|
||
}
|
||
else if (state == 4)
|
||
{
|
||
series.IsDeleted = true;
|
||
|
||
var study = await _repository.Where<DicomStudy>(t => t.Id == studyId, true).IgnoreQueryFilters().FirstOrDefaultAsync();
|
||
if (study == null) return Null404NotFound(study);
|
||
|
||
var instanceIdList = await _repository.Where<DicomInstance>(t => t.SeriesId == seriesId).Select(t => t.Id).ToListAsync();
|
||
|
||
//instanceIdList.ForEach(t =>
|
||
//{
|
||
// var path = _dicomFileStoreHelper.GetInstanceFilePath(study, seriesId, t.ToString());
|
||
|
||
// if (System.IO.File.Exists(path))
|
||
// {
|
||
// File.Delete(path);
|
||
// }
|
||
|
||
//});
|
||
|
||
study.InstanceCount = study.InstanceCount - instanceIdList.Count;
|
||
study.SeriesCount = study.SeriesCount - 1;
|
||
|
||
study.IsDeleted = study.SeriesCount == 0;
|
||
|
||
}
|
||
else if (state == 5)
|
||
{
|
||
series.IsDeleted = false;
|
||
|
||
var study = await _repository.Where<DicomStudy>(t => t.Id == studyId, true).IgnoreQueryFilters().FirstOrDefaultAsync();
|
||
|
||
if (study == null) return Null404NotFound(study);
|
||
|
||
var instanceIdList = await _repository.Where<DicomInstance>(t => t.SeriesId == seriesId).Select(t => t.Id).ToListAsync();
|
||
|
||
study.InstanceCount = study.InstanceCount + instanceIdList.Count;
|
||
|
||
study.SeriesCount = study.SeriesCount + 1;
|
||
|
||
study.IsDeleted = study.SeriesCount == 0;
|
||
}
|
||
|
||
return ResponseOutput.Ok(await _repository.SaveChangesAsync());
|
||
}
|
||
|
||
|
||
/// <summary>
|
||
///type 1 :study 2: series 3:非dicom QC修改检查部位和 拍片类型
|
||
/// </summary>
|
||
/// <param name="id"></param>
|
||
/// <param name="subjectVisitId"></param>
|
||
/// <param name="type"></param>
|
||
/// <param name="modality"></param>
|
||
/// <param name="bodyPart"></param>
|
||
/// <returns></returns>
|
||
[HttpPut("{trialId:guid}/{subjectVisitId:guid}/{id:guid}/{type:int}")]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> UpdateModality(Guid id, Guid subjectVisitId, int type, [FromQuery] string modality, [FromQuery] string bodyPart)
|
||
{
|
||
|
||
VerifyIsCanQC(null, subjectVisitId);
|
||
|
||
var DicomSeriesdata = await _repository.GetQueryable<DicomSeries>().Where(x => x.StudyId == id).ToListAsync();
|
||
var study = await _repository.FirstOrDefaultAsync<DicomStudy>(t => t.Id == id);
|
||
List<DataInspection> datas = new List<DataInspection>();
|
||
DateTime time = DateTime.Now.AddMilliseconds(500);
|
||
if (type == 1)
|
||
{
|
||
|
||
if (study == null) return Null404NotFound(study);
|
||
|
||
study.BodyPartForEdit = bodyPart;
|
||
study.Modalities = modality;
|
||
await _repository.BatchUpdateAsync<DicomSeries>(t => t.StudyId == id, r => new DicomSeries() { BodyPartForEdit = bodyPart, Modality = modality });
|
||
|
||
DicomSeriesdata.ForEach(x =>
|
||
{
|
||
datas.Add(new DataInspection()
|
||
{
|
||
TrialId = x.TrialId,
|
||
SiteId = x.SiteId,
|
||
SubjectId = x.SubjectId,
|
||
SubjectVisitId = x.SubjectVisitId,
|
||
GeneralId = x.Id,
|
||
CreateTime = time,
|
||
Identification = "Edit|DICOM Series|Info|Visit-Image Quanlity Control",
|
||
JsonDetail = JsonConvert.SerializeObject(new
|
||
{
|
||
StudyCode = study.StudyCode,
|
||
Modalities = study.Modalities,
|
||
SeriesNumber = x.SeriesNumber,
|
||
InstanceCount = x.InstanceCount,
|
||
SeriesTime = x.SeriesTime,
|
||
BodyPartForEdit = bodyPart,
|
||
Modality = modality
|
||
})
|
||
|
||
});
|
||
|
||
});
|
||
|
||
}
|
||
else if (type == 2)
|
||
{
|
||
var series = await _repository.FirstOrDefaultAsync<DicomSeries>(t => t.Id == id);
|
||
if (series == null) return Null404NotFound(series);
|
||
series.BodyPartForEdit = bodyPart;
|
||
|
||
DicomSeriesdata.ForEach(x =>
|
||
{
|
||
datas.Add(new DataInspection()
|
||
{
|
||
TrialId = x.TrialId,
|
||
SiteId = x.SiteId,
|
||
SubjectId = x.SubjectId,
|
||
SubjectVisitId = x.SubjectVisitId,
|
||
GeneralId = x.Id,
|
||
CreateTime = time,
|
||
Identification = "Edit|DICOM Series|Info|Visit-Image Quanlity Control",
|
||
JsonDetail = JsonConvert.SerializeObject(new
|
||
{
|
||
StudyCode = study.StudyCode,
|
||
Modalities = study.Modalities,
|
||
SeriesNumber = x.SeriesNumber,
|
||
InstanceCount = x.InstanceCount,
|
||
SeriesTime = x.SeriesTime,
|
||
BodyPartForEdit = bodyPart,
|
||
})
|
||
|
||
});
|
||
|
||
});
|
||
}
|
||
else if (type == 3)
|
||
{
|
||
|
||
}
|
||
|
||
// 移动不进去
|
||
await _trialRepository.AddListInspectionRecordAsync(datas);
|
||
await _repository.SaveChangesAsync();
|
||
return ResponseOutput.Ok();
|
||
}
|
||
|
||
|
||
/// <summary>
|
||
/// 验证是否质疑都关闭了 可以审核通过和不通过
|
||
/// </summary>
|
||
/// <param name="subjectVisitId"></param>
|
||
/// <returns></returns>
|
||
[HttpGet("{subjectVisitId:guid}")]
|
||
public async Task<IResponseOutput> VerifyCanQCPassedOrFailed(Guid subjectVisitId)
|
||
{
|
||
VerifyIsCanQC(null, subjectVisitId);
|
||
|
||
if (await _repository.AnyAsync<QCChallenge>(t => t.SubjectVisitId == subjectVisitId && t.IsClosed == false))
|
||
{
|
||
return ResponseOutput.NotOk("有质疑未关闭，不允许该操作");
|
||
}
|
||
return ResponseOutput.Ok();
|
||
}
|
||
|
||
|
||
|
||
|
||
/// <summary>
|
||
/// 删除检查列表
|
||
/// </summary>
|
||
/// <param name="ids"></param>
|
||
/// <param name="subjectVisitId"></param>
|
||
/// <param name="trialId"></param>
|
||
/// <returns></returns>SeriesCount
|
||
[HttpPost, Route("{trialId:guid}/{subjectVisitId:guid}")]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
[UnitOfWork]
|
||
public async Task<IResponseOutput> DeleteStudyList(Guid[] ids, Guid subjectVisitId, Guid trialId)
|
||
{
|
||
|
||
|
||
//提交了 但是IQC同意的时候 是可以删除的
|
||
if (await _subjectVisitRepository.AnyAsync(t => t.Id == subjectVisitId && t.SubmitState == SubmitStateEnum.Submitted &&
|
||
(!t.QCChallengeList.Any(u => u.ReuploadEnum == QCChanllengeReuploadEnum.QCAgreeUpload))))
|
||
{
|
||
return ResponseOutput.NotOk("CRC Has Submited Image，can not delete");
|
||
}
|
||
var waitDeleteStudyList = await _dicomStudyRepository.Where(x => ids.Contains(x.Id)).ToListAsync();
|
||
|
||
List<DataInspection> datas = new List<DataInspection>();
|
||
|
||
waitDeleteStudyList.ForEach(x =>
|
||
{
|
||
|
||
|
||
datas.Add(new DataInspection()
|
||
{
|
||
|
||
SiteId = x.SiteId,
|
||
SubjectId = x.SubjectId,
|
||
TrialId = x.TrialId,
|
||
SubjectVisitId = x.SubjectVisitId,
|
||
GeneralId = x.Id,
|
||
CreateTime = DateTime.Now,
|
||
Identification = "Delete|DICOM Study|Data|Visit-Image Upload",
|
||
JsonDetail = JsonConvert.SerializeObject(new
|
||
{
|
||
studyUid = x.StudyCode,
|
||
modality = x.Modalities,
|
||
bodyPart = x.BodyPartForEdit,
|
||
seriesNum = x.SeriesCount,
|
||
fileNum = x.InstanceCount,
|
||
studyTime = x.StudyTime?.ToString("yyyy-MM-dd")
|
||
|
||
})
|
||
});
|
||
});
|
||
|
||
|
||
|
||
var createtime = DateTime.Now.AddMilliseconds(200);
|
||
foreach (var study in waitDeleteStudyList)
|
||
{
|
||
|
||
var id = study.Id;
|
||
|
||
await _dicomStudyRepository.DeleteAsync(study, true);
|
||
var succeess2 = await _repository.BatchDeleteAsync<DicomInstance>(t => t.StudyId == id);
|
||
|
||
var DicomSeriess = await _repository.GetQueryable<DicomSeries>().Where(t => t.StudyId == id).Select(x => new
|
||
{
|
||
x.StudyId,
|
||
x.SubjectId,
|
||
x.SiteId,
|
||
x.TrialId,
|
||
x.Id,
|
||
x.SubjectVisitId,
|
||
x.SeriesTime,
|
||
x.IsReading,
|
||
x.InstanceCount,
|
||
x.SeriesNumber,
|
||
StudyCode = x.DicomStudy.StudyCode,
|
||
Modalities = x.DicomStudy.Modalities,
|
||
|
||
}).ToListAsync();
|
||
|
||
DicomSeriess.ForEach(x =>
|
||
{
|
||
datas.Add(new DataInspection()
|
||
{
|
||
|
||
SiteId = x.SiteId,
|
||
SubjectId = x.SubjectId,
|
||
TrialId = x.TrialId,
|
||
GeneralId = x.Id,
|
||
SubjectVisitId = x.SubjectVisitId,
|
||
CreateTime = createtime,
|
||
Identification = "Delete|DICOM Series|Data|Visit-Image Upload",
|
||
JsonDetail = JsonConvert.SerializeObject(new
|
||
{
|
||
StudyCode = x.StudyCode,
|
||
Modalities = x.Modalities,
|
||
SeriesNumber = x.SeriesNumber,
|
||
InstanceCount = x.InstanceCount,
|
||
SeriesTime = x.SeriesTime,
|
||
IsReading = x.IsReading,
|
||
|
||
})
|
||
});
|
||
});
|
||
|
||
var success3 = await _repository.BatchDeleteAsync<DicomSeries>(t => t.StudyId == id);
|
||
var success4 = await _repository.BatchDeleteAsync<StudyMonitor>(t => t.StudyId == id);
|
||
|
||
//删除 物理文件
|
||
|
||
var instanceIdList = await _repository.Where<DicomInstance>(t => t.StudyId == id)
|
||
.Select(t => new { InstanceId = t.Id, t.SeriesId, t.StudyId, t.SubjectId, t.SiteId }).ToListAsync();
|
||
|
||
instanceIdList.ForEach(t =>
|
||
{
|
||
var path = _dicomFileStoreHelper.GetInstanceFilePath(new DicomStudy() { Id = t.StudyId, SubjectId = t.SubjectId, TrialId = trialId, SiteId = t.SiteId, SubjectVisitId = subjectVisitId }, t.SeriesId, t.InstanceId.ToString());
|
||
|
||
if (System.IO.File.Exists(path))
|
||
{
|
||
File.Delete(path);
|
||
}
|
||
|
||
});
|
||
}
|
||
|
||
|
||
|
||
var subvisit = await _repository.GetQueryable<SubjectVisit>().FirstOrDefaultAsync(x => x.Id == subjectVisitId);
|
||
|
||
await _inspectionService.AddListInspectionRecordAsync(datas);
|
||
return ResponseOutput.Ok();
|
||
}
|
||
|
||
#endregion
|
||
|
||
|
||
public async void VerifyIsCanQC(SubjectVisit? subjectVisit, Guid? sujectVisitId = null)
|
||
{
|
||
if (sujectVisitId != null)
|
||
{
|
||
subjectVisit = await (_subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == sujectVisitId)).IfNullThrowException();
|
||
}
|
||
|
||
|
||
if (subjectVisit!.CurrentActionUserId != _userInfo.Id)
|
||
{
|
||
throw new BusinessValidationFailedException("您不是该质控任务当前领取人，没有操作权限!");
|
||
}
|
||
}
|
||
|
||
#region 临床数据签名 领取、 设置紧急、RequestToQC QC通过、不通过
|
||
|
||
|
||
/// <summary>替换当前领取人 </summary>
|
||
[HttpPut("{trialId:guid}/{subjectVisitId:guid}")]
|
||
public async Task<IResponseOutput> ReplaceQCTaskActionUser(Guid trialId, Guid subjectVisitId)
|
||
{
|
||
var dbSubjectVisit = (await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == subjectVisitId)).IfNullThrowException();
|
||
|
||
dbSubjectVisit.IsTake = true;
|
||
|
||
dbSubjectVisit.CurrentActionUserId = _userInfo.Id;
|
||
|
||
dbSubjectVisit.CurrentActionUserExpireTime = DateTime.Now.AddHours(1);
|
||
|
||
var success = await _subjectVisitRepository.SaveChangesAsync();
|
||
|
||
return ResponseOutput.Result(success);
|
||
}
|
||
|
||
|
||
/// <summary>
|
||
/// 手动领取 或者取消 QC任务
|
||
/// </summary>
|
||
/// <param name="trialId"></param>
|
||
/// <param name="subjectVisitId"></param>
|
||
/// <param name="obtaionOrCancel">true 获取 false是取消领取</param>
|
||
/// <returns></returns>
|
||
[HttpPost("{trialId:guid}/{subjectVisitId:guid}/{obtaionOrCancel:bool}")]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> ObtainOrCancelQCTask(Guid trialId, Guid subjectVisitId, bool obtaionOrCancel)
|
||
{
|
||
|
||
if (await _subjectVisitRepository.AnyAsync(t => t.CurrentActionUserId != null && t.IsTake && t.Id == subjectVisitId))
|
||
{
|
||
throw new BusinessValidationFailedException("当前访视已被领取，不允许领取");
|
||
}
|
||
|
||
var dbSubjectVisit = (await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == subjectVisitId)).IfNullThrowException();
|
||
|
||
|
||
var trialConfig = await _trialRepository
|
||
.Select(t => new { TrialId = t.Id, t.QCProcessEnum, t.IsImageConsistencyVerification })
|
||
.FirstOrDefaultAsync(t => t.TrialId == trialId)
|
||
.IfNullThrowException();
|
||
|
||
if (obtaionOrCancel)
|
||
{
|
||
|
||
if (await _subjectVisitRepository.AnyAsync(t => t.Trial.QCQuestionConfirmedUserId == null && t.Id == subjectVisitId))
|
||
{
|
||
return ResponseOutput.NotOk("QC问题未确认，不允许领取任务");
|
||
}
|
||
|
||
|
||
//if (await _subjectVisitRepository.AnyAsync(t => t.IsTake &&
|
||
// t.SubjectId != dbSubjectVisit.SubjectId &&
|
||
// t.CurrentActionUserId == _userInfo.Id &&
|
||
// t.TrialId == dbSubjectVisit.TrialId
|
||
// ))
|
||
//{
|
||
|
||
|
||
// return ResponseOutput.NotOk("您已经领取了其他受试者，完成后才允许领取新的受试者");
|
||
//}
|
||
|
||
#region 处理验证
|
||
|
||
if (trialConfig.QCProcessEnum == TrialQCProcess.NotAudit)
|
||
{
|
||
return ResponseOutput.NotOk("项目配置为不审，没有领取QC Task");
|
||
}
|
||
else if (trialConfig.QCProcessEnum == TrialQCProcess.SingleAudit)
|
||
{
|
||
if (dbSubjectVisit.PreliminaryAuditUserId == _userInfo.Id)
|
||
{
|
||
return ResponseOutput.NotOk("初审已通过，不能继续领取");
|
||
}
|
||
|
||
if (dbSubjectVisit.SubmitState == SubmitStateEnum.Submitted && dbSubjectVisit.AuditState == AuditStateEnum.ToAudit)
|
||
{
|
||
dbSubjectVisit.AuditState = AuditStateEnum.InPrimaryQC;
|
||
}
|
||
if (dbSubjectVisit.SubmitState == SubmitStateEnum.Submitted && dbSubjectVisit.AuditState == AuditStateEnum.InPrimaryQC)
|
||
{
|
||
//单审QC 释放后 也是可以领取的
|
||
}
|
||
else
|
||
{
|
||
return ResponseOutput.NotOk("项目配置为单审,不满足SubmmitState：已提交 或者 AuditState：待审核/审核中, 不允许领取,请刷新界面");
|
||
}
|
||
}
|
||
else if (trialConfig.QCProcessEnum == TrialQCProcess.DoubleAudit)
|
||
{
|
||
if (dbSubjectVisit.PreliminaryAuditUserId == _userInfo.Id)
|
||
{
|
||
return ResponseOutput.NotOk("复审不能和初审是同一个人");
|
||
}
|
||
|
||
//提交 并且初审通过 那么领取后进入 复审中
|
||
if (dbSubjectVisit.SubmitState == SubmitStateEnum.Submitted && dbSubjectVisit.AuditState == AuditStateEnum.PrimaryQCPassed)
|
||
{
|
||
dbSubjectVisit.AuditState = AuditStateEnum.InSecondaryQC;
|
||
|
||
}
|
||
else if (dbSubjectVisit.SubmitState == SubmitStateEnum.Submitted && dbSubjectVisit.AuditState == AuditStateEnum.ToAudit)
|
||
{
|
||
dbSubjectVisit.AuditState = AuditStateEnum.InPrimaryQC;
|
||
}
|
||
else if (dbSubjectVisit.SubmitState == SubmitStateEnum.Submitted && (dbSubjectVisit.AuditState == AuditStateEnum.InPrimaryQC || dbSubjectVisit.AuditState == AuditStateEnum.InSecondaryQC))
|
||
{
|
||
//初审中 复审中 领取也是ok的 其他人接着做
|
||
}
|
||
else
|
||
{
|
||
return ResponseOutput.NotOk("项目配置为复审，不满足提交状态：已提交 或者 审核状态：待审核/QC中, 不允许领取,请刷新界面");
|
||
}
|
||
}
|
||
|
||
#endregion
|
||
|
||
dbSubjectVisit.IsTake = true;
|
||
|
||
dbSubjectVisit.CurrentActionUserId = _userInfo.Id;
|
||
|
||
dbSubjectVisit.CurrentActionUserExpireTime = DateTime.Now.AddHours(1);
|
||
|
||
|
||
//启动定时任务 1h后处理
|
||
//BackgroundJob.Schedule<IObtainTaskAutoCancelJob>(t => t.CancelQCObtaion(subjectVisitId, DateTime.Now), TimeSpan.FromHours(1));
|
||
}
|
||
else
|
||
{
|
||
|
||
if (trialConfig.QCProcessEnum == TrialQCProcess.NotAudit)
|
||
{
|
||
return ResponseOutput.NotOk("项目配置为不审，没有取消QC Task");
|
||
}
|
||
else if (trialConfig.QCProcessEnum == TrialQCProcess.SingleAudit)
|
||
{
|
||
|
||
if (dbSubjectVisit.SubmitState == SubmitStateEnum.Submitted && dbSubjectVisit.AuditState == AuditStateEnum.InPrimaryQC)
|
||
{
|
||
dbSubjectVisit.AuditState = AuditStateEnum.ToAudit;
|
||
}
|
||
|
||
else
|
||
{
|
||
return ResponseOutput.NotOk("项目配置为单审,不满足SubmmitState：已提交 或者 AuditState：InPrimaryQC, 不允许释放");
|
||
}
|
||
}
|
||
else if (trialConfig.QCProcessEnum == TrialQCProcess.DoubleAudit)
|
||
{
|
||
|
||
//提交 并且初审通过 那么领取后进入 复审中
|
||
if (dbSubjectVisit.SubmitState == SubmitStateEnum.Submitted && dbSubjectVisit.AuditState == AuditStateEnum.InSecondaryQC)
|
||
{
|
||
dbSubjectVisit.AuditState = AuditStateEnum.PrimaryQCPassed;
|
||
|
||
}
|
||
else if (dbSubjectVisit.SubmitState == SubmitStateEnum.Submitted && dbSubjectVisit.AuditState == AuditStateEnum.InPrimaryQC)
|
||
{
|
||
dbSubjectVisit.AuditState = AuditStateEnum.ToAudit;
|
||
}
|
||
|
||
else
|
||
{
|
||
return ResponseOutput.NotOk("项目配置为复审，不满足提交状态：已提交 或者 审核状态：InPrimaryQC/InSecondaryQC, 不允许释放");
|
||
}
|
||
}
|
||
|
||
dbSubjectVisit.IsTake = false;
|
||
|
||
dbSubjectVisit.CurrentActionUserId = null;
|
||
|
||
dbSubjectVisit.CurrentActionUserExpireTime = null;
|
||
|
||
}
|
||
var success = await _subjectVisitRepository.SaveChangesAsync();
|
||
return ResponseOutput.Result(success);
|
||
}
|
||
|
||
|
||
|
||
[HttpPost]
|
||
public async Task<IResponseOutput> VerifyCRCRequestToQC(CRCRequestToQCCommand cRCRequestToQCCommand)
|
||
{
|
||
var dbSubjectVisitList = await _subjectVisitRepository.Where(t => cRCRequestToQCCommand.SubjectVisitIds.Contains(t.Id), true).ToListAsync();
|
||
|
||
//普通提交
|
||
if (dbSubjectVisitList.Count() == 1)
|
||
{
|
||
var sv = dbSubjectVisitList[0];
|
||
|
||
var nameList = await _subjectVisitRepository.Where(t => t.SubjectId == sv.SubjectId && t.SubmitState != SubmitStateEnum.Submitted && t.VisitNum < sv.VisitNum).Select(t => t.VisitName).ToListAsync() ?? new List<string>();
|
||
|
||
if (sv.PDState == PDStateEnum.PDProgress)
|
||
{
|
||
|
||
if (nameList.Count() > 0)
|
||
{
|
||
return ResponseOutput.NotOk($"系统检测发现该受试者当前访视之前的访视：{string.Join('、', nameList)}，未提交，疾病进展确认对阅片时限要求很高，请将上述访视提交或标记失访后，再提交当前访视！", 1, ApiResponseCodeEnum.NeedTips);
|
||
}
|
||
}
|
||
else
|
||
{
|
||
if (nameList.Count() > 0)
|
||
{
|
||
|
||
return ResponseOutput.NotOk($"系统检测发现该受试者当前访视之前的访视：{string.Join('、', nameList)}，未提交。请在该访视提交后，尽快完成上述访视的影像上传和提交。", 0, ApiResponseCodeEnum.NeedTips);
|
||
}
|
||
}
|
||
}
|
||
|
||
return ResponseOutput.Ok();
|
||
|
||
|
||
}
|
||
|
||
/// <summary>
|
||
/// CRC RequestToQC 批量提交
|
||
/// </summary>
|
||
/// <returns></returns>
|
||
[HttpPost]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> CRCRequestToQC(CRCRequestToQCCommand cRCRequestToQCCommand)
|
||
{
|
||
var trialConfig = (await _trialRepository
|
||
.Select(t => new { TrialId = t.Id, t.QCProcessEnum, t.IsImageConsistencyVerification, t.IsUrgent, t.IsHaveFirstGiveMedicineDate, t.ClinicalInformationTransmissionEnum })
|
||
.FirstOrDefaultAsync(t => t.TrialId == cRCRequestToQCCommand.TrialId)).IfNullThrowException();
|
||
|
||
|
||
var dbSubjectVisitList = await _subjectVisitRepository.Where(t => cRCRequestToQCCommand.SubjectVisitIds.Contains(t.Id), true).Include(t => t.Subject).ToListAsync();
|
||
|
||
|
||
if (dbSubjectVisitList.Any(t => t.SubmitState == SubmitStateEnum.None))
|
||
{
|
||
return ResponseOutput.NotOk("有访视未上传任何Dicom/非Dicom数据 不允许提交");
|
||
}
|
||
|
||
foreach (var dbSubjectVisit in dbSubjectVisitList)
|
||
{
|
||
|
||
//基线不验证
|
||
if (trialConfig.IsHaveFirstGiveMedicineDate && !dbSubjectVisit.IsBaseLine && dbSubjectVisit.Subject.FirstGiveMedicineTime == null)
|
||
{
|
||
return ResponseOutput.NotOk("项目配置了需要填写首次给药日期 但是受试者没有填写首次给药日期，不允许提交");
|
||
}
|
||
|
||
//基线 且配置了临床数据
|
||
if (trialConfig.ClinicalInformationTransmissionEnum != 0 && dbSubjectVisit.IsBaseLine/*&&dbSubjectVisit.ClinicalDataSignUserId==null*/)
|
||
{
|
||
//已确认临床数据完整性
|
||
dbSubjectVisit.IsConfirmedClinicalData = true;
|
||
|
||
//var signSuccess = await _repository.UpdateFromQueryAsync<TrialSign>(t => t.Id == cRCRequestToQCCommand.SignId, u => new TrialSign() { IsCompleted = true });
|
||
|
||
|
||
////现在修改为 提交时 设置签名信息
|
||
//dbSubjectVisit.ClinicalDataSignUserId = _userInfo.Id;
|
||
//dbSubjectVisit.ClinicalDataSignTime = DateTime.Now;
|
||
|
||
//那么没有录入 不允许提交
|
||
//if (!await _repository.AnyAsync<SubjectVisit>(t => t.PreviousHistoryList.Any() || t.PreviousOtherList.Any() || t.PreviousSurgeryList.Any()))
|
||
//{
|
||
// return ResponseOutput.NotOk("没有临床数据，不允许提交");
|
||
//}
|
||
|
||
//return ResponseOutput.NotOk("没有签名临床数据，不允许提交");
|
||
}
|
||
|
||
|
||
var maxVisit = await _subjectVisitRepository.Where(t => t.SubjectId == dbSubjectVisit.SubjectId && t.SubmitState == SubmitStateEnum.Submitted)
|
||
.OrderByDescending(t => t.VisitNum).Select(t => new { t.Id, t.VisitNum }).FirstOrDefaultAsync();
|
||
|
||
//修改受试者最新访视
|
||
dbSubjectVisit.Subject.LatestSubjectVisitId = maxVisit == null ? dbSubjectVisit.Id : maxVisit.VisitNum < dbSubjectVisit.VisitNum ? dbSubjectVisit.Id : maxVisit.Id;
|
||
|
||
//var maxVisitNum = maxVisit == null ? dbSubjectVisit.VisitNum : maxVisit.VisitNum < dbSubjectVisit.VisitNum ? dbSubjectVisit.VisitNum : maxVisit.VisitNum;
|
||
|
||
////判断是否有缺失影像
|
||
//dbSubjectVisit.Subject.IsMissingImages = await _subjectVisitRepository.AnyAsync(t => (t.VisitNum < maxVisitNum && t.SubmitState != SubmitStateEnum.Submitted && t.IsLostVisit == false));
|
||
|
||
//项目或者Subject IsUrgent 提交时 访视也设置为紧急
|
||
if (trialConfig.IsUrgent || dbSubjectVisit.Subject.IsUrgent || (dbSubjectVisit.PDState == PDStateEnum.PDProgress && !dbSubjectVisit.IsBaseLine) || (dbSubjectVisit.IsEnrollmentConfirm && dbSubjectVisit.IsBaseLine))
|
||
{
|
||
dbSubjectVisit.IsUrgent = true;
|
||
}
|
||
|
||
|
||
if (dbSubjectVisit.SubmitState == SubmitStateEnum.ToSubmit || dbSubjectVisit.SubmitState == SubmitStateEnum.Submitted)
|
||
{
|
||
dbSubjectVisit.SubmitState = SubmitStateEnum.Submitted;
|
||
dbSubjectVisit.SubmitTime = DateTime.Now;
|
||
|
||
}
|
||
|
||
//不审 直接QC通过 可能一致性核查 也可能不一致性核查
|
||
if (trialConfig.QCProcessEnum == TrialQCProcess.NotAudit)
|
||
{
|
||
dbSubjectVisit.AuditState = AuditStateEnum.QCPassed;
|
||
|
||
// 不一致性核查 就CVPassed ToForward 否则就是待核查
|
||
dbSubjectVisit.CheckState = trialConfig.IsImageConsistencyVerification ? CheckStateEnum.ToCheck : CheckStateEnum.CVPassed;
|
||
|
||
dbSubjectVisit.ForwardState = trialConfig.IsImageConsistencyVerification ? ForwardStateEnum.None : ForwardStateEnum.ToForward;
|
||
|
||
}
|
||
else if (trialConfig.QCProcessEnum == TrialQCProcess.SingleAudit)
|
||
{
|
||
dbSubjectVisit.AuditState = AuditStateEnum.ToAudit;
|
||
}
|
||
else if (trialConfig.QCProcessEnum == TrialQCProcess.DoubleAudit)
|
||
{
|
||
dbSubjectVisit.AuditState = AuditStateEnum.ToAudit;
|
||
|
||
|
||
}
|
||
|
||
|
||
}
|
||
|
||
|
||
var success = await _repository.SaveChangesAsync();
|
||
List<DataInspection> datas = new List<DataInspection>();
|
||
//dbSubjectVisitList.ForEach(x =>
|
||
//{
|
||
// datas.Add(new DataInspection()
|
||
// {
|
||
|
||
// SiteId = x.SiteId,
|
||
// SubjectId = x.SubjectId,
|
||
// TrialId = x.TrialId,
|
||
// SubjectVisitId = x.Id,
|
||
// Identification= "Edit|Visit|Status|Visit-Image Upload",
|
||
// JsonDetail = JsonConvert.SerializeObject(new
|
||
// {
|
||
// SubmitState = "已提交",
|
||
|
||
|
||
// })
|
||
// });
|
||
//});
|
||
|
||
dbSubjectVisitList.ForEach(x =>
|
||
{
|
||
datas.Add(new DataInspection()
|
||
{
|
||
|
||
SiteId = x.SiteId,
|
||
SubjectId = x.SubjectId,
|
||
TrialId = x.TrialId,
|
||
SubjectVisitId = x.Id,
|
||
Identification = "Edit|Visit|Status|Visit-Image Upload-1",
|
||
JsonDetail = x.ToJcJson(),
|
||
});
|
||
});
|
||
|
||
await _inspectionService.AddListInspectionRecordAsync(datas);
|
||
return ResponseOutput.Result(success);
|
||
|
||
|
||
|
||
}
|
||
|
||
/// <summary>
|
||
/// 设置QC 通过或者不通过 7:QC failed 8：QC passed
|
||
/// </summary>
|
||
/// <param name="trialId"></param>
|
||
/// <param name="subjectVisitId"></param>
|
||
/// <param name="auditState"></param>
|
||
/// <returns></returns>
|
||
[HttpPost("{trialId:guid}/{subjectVisitId:guid}/{auditState:int}")]
|
||
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> QCPassedOrFailed(Guid trialId, Guid subjectVisitId, [FromRoute] AuditStateEnum auditState)
|
||
{
|
||
|
||
if (!await _repository.AnyAsync<TrialUser>(t => t.TrialId == trialId && t.UserId == _userInfo.Id))
|
||
{
|
||
return ResponseOutput.NotOk("您已经被移出项目，不允许该操作");
|
||
}
|
||
|
||
//判断质疑是否都关闭了
|
||
if (await _repository.AnyAsync<QCChallenge>(t => t.SubjectVisitId == subjectVisitId && t.IsClosed == false))
|
||
{
|
||
return ResponseOutput.NotOk("有质疑未关闭，不允许该操作");
|
||
}
|
||
|
||
|
||
|
||
var trialConfig = await _trialRepository
|
||
.Select(t => new { TrialId = t.Id, t.QCProcessEnum, t.IsImageConsistencyVerification })
|
||
.FirstOrDefaultAsync(t => t.TrialId == trialId)
|
||
.IfNullThrowException();
|
||
|
||
var dbSubjectVisit = (await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == subjectVisitId)).IfNullThrowException();
|
||
|
||
VerifyIsCanQC(dbSubjectVisit);
|
||
|
||
//有人QC Passed
|
||
if (auditState == AuditStateEnum.QCPassed)
|
||
{
|
||
//判断 QC流程 不审 单审 双审
|
||
|
||
if (trialConfig.QCProcessEnum == TrialQCProcess.NotAudit)
|
||
{
|
||
return ResponseOutput.NotOk("不审状态下，不允许设置为QC Passed");
|
||
|
||
}
|
||
else if (trialConfig.QCProcessEnum == TrialQCProcess.SingleAudit)
|
||
{
|
||
if (dbSubjectVisit.AuditState == AuditStateEnum.InPrimaryQC)
|
||
{
|
||
if (!await _repository.AnyAsync<TrialQCQuestionAnswer>(t => t.SubjectVisitId == subjectVisitId && t.CurrentQCEnum == CurrentQC.First))
|
||
{
|
||
return ResponseOutput.NotOk("必须填写审核问题，并保存，否则不允许提交");
|
||
}
|
||
|
||
// 单审
|
||
dbSubjectVisit.AuditState = AuditStateEnum.QCPassed;
|
||
dbSubjectVisit.CheckState = trialConfig.IsImageConsistencyVerification ? CheckStateEnum.ToCheck : CheckStateEnum.CVPassed;
|
||
dbSubjectVisit.ForwardState = trialConfig.IsImageConsistencyVerification ? ForwardStateEnum.None : ForwardStateEnum.ToForward;
|
||
dbSubjectVisit.PreliminaryAuditUserId = _userInfo.Id;
|
||
dbSubjectVisit.PreliminaryAuditTime = DateTime.Now;
|
||
|
||
}
|
||
else
|
||
{
|
||
return ResponseOutput.NotOk("项目配置为单审 当前审核状态不为 InPrimaryQC，不能变更到 QCPassed");
|
||
}
|
||
|
||
}
|
||
else if (trialConfig.QCProcessEnum == TrialQCProcess.DoubleAudit)
|
||
{
|
||
|
||
// 双审 如果当前db 状态是 InPrimaryQC 当前操作为 QCPassed 那么设置为 PrimaryQCPassed
|
||
if (dbSubjectVisit.AuditState == AuditStateEnum.InPrimaryQC)
|
||
{
|
||
|
||
if (!await _repository.AnyAsync<TrialQCQuestionAnswer>(t => t.SubjectVisitId == subjectVisitId && t.CurrentQCEnum == CurrentQC.First))
|
||
{
|
||
return ResponseOutput.NotOk("必须填写审核问题，并保存，否则不允许提交");
|
||
}
|
||
|
||
dbSubjectVisit.AuditState = AuditStateEnum.PrimaryQCPassed;
|
||
dbSubjectVisit.PreliminaryAuditUserId = _userInfo.Id;
|
||
dbSubjectVisit.PreliminaryAuditTime = DateTime.Now;
|
||
|
||
|
||
}
|
||
else if (dbSubjectVisit.AuditState == AuditStateEnum.InSecondaryQC)
|
||
{
|
||
|
||
if (!await _repository.AnyAsync<TrialQCQuestionAnswer>(t => t.SubjectVisitId == subjectVisitId && t.CurrentQCEnum == CurrentQC.Second))
|
||
{
|
||
return ResponseOutput.NotOk("必须填写审核问题，并保存，否则不允许提交");
|
||
}
|
||
|
||
dbSubjectVisit.AuditState = AuditStateEnum.QCPassed;
|
||
|
||
dbSubjectVisit.CheckState = trialConfig.IsImageConsistencyVerification ? CheckStateEnum.ToCheck : CheckStateEnum.CVPassed;
|
||
|
||
dbSubjectVisit.ForwardState = trialConfig.IsImageConsistencyVerification ? ForwardStateEnum.None : ForwardStateEnum.ToForward;
|
||
|
||
dbSubjectVisit.ReviewAuditUserId = _userInfo.Id;
|
||
|
||
dbSubjectVisit.ReviewAuditTime = DateTime.Now;
|
||
|
||
|
||
}
|
||
else
|
||
{
|
||
return ResponseOutput.NotOk($"项目配置为双审 当前审核状态为 {dbSubjectVisit.AuditState}，不能变更到 QCPassed");
|
||
}
|
||
}
|
||
}
|
||
|
||
else if (auditState == AuditStateEnum.QCFailed)
|
||
{
|
||
//判断 QC流程 不审 单审 双审
|
||
|
||
if (trialConfig.QCProcessEnum == TrialQCProcess.NotAudit)
|
||
{
|
||
return ResponseOutput.NotOk("不审状态下，不允许设置为QC Failed");
|
||
}
|
||
else if (trialConfig.QCProcessEnum == TrialQCProcess.SingleAudit)
|
||
{
|
||
// 单审
|
||
if (dbSubjectVisit.AuditState == AuditStateEnum.ToAudit)
|
||
{
|
||
dbSubjectVisit.AuditState = AuditStateEnum.QCFailed;
|
||
|
||
}
|
||
else
|
||
{
|
||
return ResponseOutput.NotOk("项目配置为单审 当前审核状态不为 ToAudit，不能变更到 QCFailed");
|
||
}
|
||
}
|
||
else if (trialConfig.QCProcessEnum == TrialQCProcess.DoubleAudit)
|
||
{
|
||
// 双审
|
||
if (dbSubjectVisit.AuditState == AuditStateEnum.InPrimaryQC || dbSubjectVisit.AuditState == AuditStateEnum.InSecondaryQC)
|
||
{
|
||
dbSubjectVisit.AuditState = AuditStateEnum.QCFailed;
|
||
}
|
||
else
|
||
{
|
||
return ResponseOutput.NotOk($"项目配置为双审 当前审核状态为 {dbSubjectVisit.AuditState}，不能变更到 QCFailed");
|
||
}
|
||
|
||
|
||
}
|
||
}
|
||
|
||
dbSubjectVisit.IsTake = false;
|
||
dbSubjectVisit.CurrentActionUserId = null;
|
||
dbSubjectVisit.CurrentActionUserExpireTime = null;
|
||
|
||
//删除 软删除的物理文件
|
||
|
||
|
||
|
||
var instanceIdList = await _repository.Where<DicomInstance>(t => t.DicomSerie.IsDeleted && t.SubjectVisitId == subjectVisitId)
|
||
.Select(t => new { InstanceId = t.Id, t.SeriesId, t.StudyId, t.SubjectId, t.SiteId }).ToListAsync();
|
||
|
||
// 删除序列
|
||
List<DataInspection> datas = new List<DataInspection>();
|
||
var DicomSeriesdata = await _repository.GetQueryable<DicomSeries>().Where(x => x.SubjectVisitId == subjectVisitId && x.IsDeleted).Select(x => new
|
||
{
|
||
StudyCode = x.DicomStudy.StudyCode,
|
||
Modalities = x.DicomStudy.Modalities,
|
||
SeriesNumber = x.SeriesNumber,
|
||
InstanceCount = x.InstanceCount,
|
||
SeriesTime = x.SeriesTime,
|
||
TrialId = x.TrialId,
|
||
SiteId = x.SiteId,
|
||
x.SubjectId,
|
||
x.SubjectVisitId,
|
||
x.IsDeleted,
|
||
x.IsReading,
|
||
x.Id,
|
||
|
||
}).ToListAsync();
|
||
DateTime time = DateTime.Now.AddMilliseconds(500);
|
||
DicomSeriesdata.ForEach(x =>
|
||
{
|
||
datas.Add(new DataInspection()
|
||
{
|
||
TrialId = x.TrialId,
|
||
SiteId = x.SiteId,
|
||
SubjectId = x.SubjectId,
|
||
SubjectVisitId = x.SubjectVisitId,
|
||
GeneralId = x.Id,
|
||
CreateTime = time,
|
||
Identification = "Delete|DICOM Series|Data|Visit-Image Quanlity Control",
|
||
JsonDetail = JsonConvert.SerializeObject(new
|
||
{
|
||
StudyCode = x.StudyCode,
|
||
Modalities = x.Modalities,
|
||
SeriesNumber = x.SeriesNumber,
|
||
InstanceCount = x.InstanceCount,
|
||
SeriesTime = x.SeriesTime,
|
||
IsReading = x.IsReading,
|
||
IsDeleted = x.IsDeleted,
|
||
|
||
})
|
||
|
||
});
|
||
|
||
});
|
||
|
||
|
||
await _inspectionService.AddListInspectionRecordAsync(datas);
|
||
instanceIdList.ForEach(t =>
|
||
{
|
||
var path = _dicomFileStoreHelper.GetInstanceFilePath(new DicomStudy() { Id = t.StudyId, SubjectId = t.SubjectId, TrialId = trialId, SiteId = t.SiteId, SubjectVisitId = subjectVisitId }, t.SeriesId, t.InstanceId.ToString());
|
||
|
||
if (System.IO.File.Exists(path))
|
||
{
|
||
File.Delete(path);
|
||
}
|
||
|
||
});
|
||
|
||
await _repository.SaveChangesAsync();
|
||
|
||
//var success = await _repository.BatchUpdateAsync<TrialSign>(t => t.Id == signId, u => new TrialSign() { IsCompleted = true });
|
||
|
||
return ResponseOutput.Result(true);
|
||
|
||
|
||
}
|
||
|
||
|
||
/// <summary>
|
||
/// 设置、取消 访视紧急
|
||
/// </summary>
|
||
/// <param name="trialId"></param>
|
||
/// <param name="subjectVisitId"></param>
|
||
/// <param name="setOrCancel"></param>
|
||
/// <returns></returns>
|
||
[HttpPut("{trialId:guid}/{subjectVisitId:guid}/{setOrCancel:bool}")]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> SetVisitUrgent(Guid trialId, Guid subjectVisitId, bool setOrCancel)
|
||
{
|
||
var sv = await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == subjectVisitId);
|
||
if (sv == null) return Null404NotFound(sv);
|
||
|
||
sv.IsUrgent = setOrCancel;
|
||
var success = await _repository.SaveChangesAsync();
|
||
return ResponseOutput.Ok();
|
||
}
|
||
|
||
#endregion
|
||
|
||
|
||
#region 重传、重传完设置
|
||
|
||
/// <summary>验证质疑对话页面 是否可以 跳转到重传页面 进行重传 </summary>
|
||
[HttpGet("{trialId:guid}/{qcChallengeId:guid}")]
|
||
public async Task<IResponseOutput> VerifyReuploadIsCanJump(Guid trialId, Guid qcChallengeId)
|
||
{
|
||
var qcChallenge = (await _qcChallengeRepository.FirstOrDefaultAsync(t => t.Id == qcChallengeId)).IfNullThrowException();
|
||
|
||
if (qcChallenge.ReuploadEnum != QCChanllengeReuploadEnum.QCAgreeUpload)
|
||
{
|
||
throw new BusinessValidationFailedException("当前重传状态不为QC同意重传，不允许重传");
|
||
}
|
||
return ResponseOutput.Ok();
|
||
}
|
||
|
||
|
||
/// <summary>
|
||
/// QA设置 同意重传
|
||
/// </summary>
|
||
/// <param name="trialId"></param>
|
||
/// <param name="qcChallengeId"></param>
|
||
/// <returns></returns>
|
||
[HttpPut("{trialId:guid}/{qcChallengeId:guid}")]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> SetNeedReupload(Guid trialId, Guid qcChallengeId)
|
||
{
|
||
if (_userInfo.UserTypeEnumInt != (int)UserTypeEnum.IQC)
|
||
{
|
||
return ResponseOutput.NotOk("重传 只允许QA 设置!");
|
||
}
|
||
|
||
//获取项目配置
|
||
var trialConfig = await _repository.Where<Trial>(t => t.Id == trialId).Select(t => new { TrialId = t.Id, t.QCProcessEnum, t.IsImageConsistencyVerification })
|
||
.FirstOrDefaultAsync().IfNullThrowException();
|
||
|
||
if (trialConfig.QCProcessEnum == TrialQCProcess.NotAudit)
|
||
{
|
||
return ResponseOutput.NotOk("不审操作，不会有需要重传的操作!");
|
||
}
|
||
|
||
var qcChallenge = (await _qcChallengeRepository.FirstOrDefaultAsync(t => t.Id == qcChallengeId)).IfNullThrowException();
|
||
|
||
if (qcChallenge.ReuploadEnum != QCChanllengeReuploadEnum.CRCRequestReupload)
|
||
{
|
||
throw new BusinessValidationFailedException("当前重传状态不为CRC申请重传，不允许设置同意重传");
|
||
}
|
||
|
||
|
||
if (await _qcChallengeRepository.CountAsync(t => t.ReuploadEnum == QCChanllengeReuploadEnum.QCAgreeUpload && t.SubjectVisitId == qcChallenge.SubjectVisitId && t.IsClosed == false) >= 1)
|
||
{
|
||
return ResponseOutput.NotOk("当前访视,有一个未关闭的质疑 QC设置了同意重传，CRC还未完成上传，当前不允许再次设置");
|
||
}
|
||
|
||
|
||
|
||
qcChallenge.ReuploadEnum = QCChanllengeReuploadEnum.QCAgreeUpload;
|
||
qcChallenge.LatestMsgTime = DateTime.Now;
|
||
qcChallenge.LatestReplyUserId = _userInfo.Id;
|
||
|
||
await _subjectVisitRepository.BatchUpdateNoTrackingAsync(t => t.Id == qcChallenge.SubjectVisitId, c => new SubjectVisit() { IsQCConfirmedReupload = true });
|
||
|
||
qcChallenge.DialogList.Add(new QCChallengeDialog()
|
||
{
|
||
SubjectVisitId = qcChallenge.SubjectVisitId,
|
||
UserTypeEnum = (UserTypeEnum)_userInfo.UserTypeEnumInt,
|
||
QCChallengeId = qcChallenge.Id,
|
||
TalkContent = "QC同意重传"
|
||
});
|
||
|
||
//双审 并且是2QC 那么需要回退到1QC 讲1QC数据清除
|
||
if (trialConfig.QCProcessEnum == TrialQCProcess.DoubleAudit && await _repository.AnyAsync<QCChallenge>(t => t.Id == qcChallengeId && t.SubjectVisit.AuditState == AuditStateEnum.InSecondaryQC))
|
||
{
|
||
|
||
var sv = await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == qcChallenge.SubjectVisitId);
|
||
|
||
if (sv == null) return Null404NotFound(sv);
|
||
|
||
// //一致性核查质疑状态
|
||
// sv.CheckChallengeState = CheckChanllengeTypeEnum.None;
|
||
//// 一致性核查状态
|
||
// sv.CheckState = CheckStateEnum.None;
|
||
// 审核状态
|
||
sv.AuditState = AuditStateEnum.InPrimaryQC;
|
||
|
||
sv.CurrentActionUserExpireTime = DateTime.Now.AddHours(1);
|
||
sv.CurrentActionUserId = _userInfo.Id;
|
||
BackgroundJob.Schedule<IObtainTaskAutoCancelJob>(t => t.CancelQCObtaion(qcChallenge.SubjectVisitId, DateTime.Now), TimeSpan.FromHours(1));
|
||
sv.IsTake = true;
|
||
|
||
sv.PreliminaryAuditUserId = null;
|
||
sv.ReviewAuditUserId = null;
|
||
|
||
|
||
//删除1QC 填写的问题答案
|
||
|
||
await _repository.BatchDeleteAsync<TrialQCQuestionAnswer>(t => t.SubjectVisitId == qcChallenge.SubjectVisitId && t.CurrentQCEnum == CurrentQC.First);
|
||
|
||
//2QC 数据变为1QC
|
||
await _repository.BatchUpdateAsync<QCChallenge>(t => t.SubjectVisitId == qcChallenge.SubjectVisitId && t.CurrentQCEnum == CurrentQC.Second, k => new QCChallenge() { CurrentQCEnum = CurrentQC.First });
|
||
await _repository.BatchUpdateAsync<TrialQCQuestionAnswer>(t => t.SubjectVisitId == qcChallenge.SubjectVisitId && t.CurrentQCEnum == CurrentQC.Second, k => new TrialQCQuestionAnswer() { CurrentQCEnum = CurrentQC.First });
|
||
|
||
}
|
||
|
||
|
||
var success = await _repository.SaveChangesAsync();
|
||
|
||
|
||
return ResponseOutput.Result(success);
|
||
|
||
}
|
||
|
||
/// <summary>
|
||
/// CRC 设置已经重传完成
|
||
/// </summary>
|
||
|
||
/// <returns></returns>
|
||
[HttpPost]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> SetReuploadFinished(CRCReuploadFinishedCommand cRCReuploadFinishedCommand)
|
||
{
|
||
if (_userInfo.UserTypeEnumInt != (int)UserTypeEnum.ClinicalResearchCoordinator)
|
||
{
|
||
throw new BusinessValidationFailedException("重传完成 只允许CRC 设置!");
|
||
}
|
||
|
||
|
||
var qcChallenge = (await _qcChallengeRepository.FirstOrDefaultAsync(t => t.Id == cRCReuploadFinishedCommand.QCChallengeId)).IfNullThrowException();
|
||
|
||
if (qcChallenge.ReuploadEnum != QCChanllengeReuploadEnum.QCAgreeUpload)
|
||
{
|
||
throw new BusinessValidationFailedException("当前重传状态不为QC同意重传，不允许设置重传完成");
|
||
}
|
||
|
||
|
||
var subjectVisitId = qcChallenge.SubjectVisitId;
|
||
|
||
if (await _subjectVisitRepository.Where(t => t.Id == subjectVisitId).SelectMany(t => t.StudyList).CountAsync() == 0 &&
|
||
await _subjectVisitRepository.Where(t => t.Id == subjectVisitId).SelectMany(t => t.NoneDicomStudyList).SelectMany(u => u.NoneDicomFileList).CountAsync() == 0)
|
||
{
|
||
throw new BusinessValidationFailedException("当前没有影像，不允许设置重传完成");
|
||
}
|
||
|
||
var trialConfig = await _trialRepository
|
||
.Select(t => new { TrialId = t.Id, t.QCProcessEnum, t.IsImageConsistencyVerification, t.IsUrgent, t.IsHaveFirstGiveMedicineDate, t.ClinicalInformationTransmissionEnum })
|
||
.Where(t => t.TrialId == cRCReuploadFinishedCommand.TrialId).FirstOrDefaultAsync();
|
||
|
||
|
||
|
||
qcChallenge.ReuploadEnum = QCChanllengeReuploadEnum.CRCReuploaded;
|
||
|
||
qcChallenge.ReUploadedTime = DateTime.Now;
|
||
|
||
qcChallenge.ReUploadUserId = _userInfo.Id;
|
||
|
||
qcChallenge.ReUploader = _userInfo.RealName;
|
||
|
||
qcChallenge.LatestMsgTime = DateTime.Now;
|
||
|
||
qcChallenge.LatestReplyUserId = _userInfo.Id;
|
||
|
||
var dbSubjectVisit = await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == qcChallenge.SubjectVisitId).IfNullThrowException();
|
||
|
||
|
||
await _subjectVisitRepository.BatchUpdateNoTrackingAsync(t => t.Id == qcChallenge.SubjectVisitId, c => new SubjectVisit() { IsQCConfirmedReupload = false });
|
||
|
||
qcChallenge.DialogList.Add(new QCChallengeDialog()
|
||
{
|
||
SubjectVisitId = qcChallenge.SubjectVisitId,
|
||
|
||
UserTypeEnum = (UserTypeEnum)_userInfo.UserTypeEnumInt,
|
||
|
||
QCChallengeId = qcChallenge.Id,
|
||
|
||
TalkContent = "CRC已重传完成"
|
||
});
|
||
|
||
|
||
//基线 且配置了临床数据
|
||
if (trialConfig.ClinicalInformationTransmissionEnum != 0 && dbSubjectVisit.IsBaseLine)
|
||
{
|
||
//已确认临床数据完整性
|
||
dbSubjectVisit.IsConfirmedClinicalData = true;
|
||
|
||
//var signSuccess = await _repository.BatchUpdateAsync<TrialSign>(t => t.Id == cRCReuploadFinishedCommand.SignId, u => new TrialSign() { IsCompleted = true });
|
||
}
|
||
|
||
var success = await _subjectVisitRepository.SaveChangesAsync();
|
||
|
||
|
||
return ResponseOutput.Result(success);
|
||
|
||
}
|
||
|
||
|
||
|
||
[HttpPut("{trialId:guid}/{qcChallengeId:guid}")]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> CRCRequestReUpload(Guid qcChallengeId)
|
||
{
|
||
var qcChallenge = (await _qcChallengeRepository.FirstOrDefaultAsync(t => t.Id == qcChallengeId)).IfNullThrowException();
|
||
|
||
|
||
if (qcChallenge.ReuploadEnum != QCChanllengeReuploadEnum.None && qcChallenge.ReuploadEnum != QCChanllengeReuploadEnum.CRCReuploaded)
|
||
{
|
||
throw new BusinessValidationFailedException("当前质疑重传状态不为初始状态|CRC重传完成状态，不允许申请重传");
|
||
}
|
||
|
||
|
||
if (qcChallenge.ReuploadEnum == QCChanllengeReuploadEnum.CRCReuploaded)
|
||
{
|
||
qcChallenge.ReUploadedTime = null;
|
||
}
|
||
|
||
qcChallenge.LatestMsgTime = DateTime.Now;
|
||
qcChallenge.LatestReplyUserId = _userInfo.Id;
|
||
qcChallenge.ReuploadEnum = QCChanllengeReuploadEnum.CRCRequestReupload;
|
||
|
||
qcChallenge.DialogList.Add(new QCChallengeDialog()
|
||
{
|
||
SubjectVisitId = qcChallenge.SubjectVisitId,
|
||
UserTypeEnum = (UserTypeEnum)_userInfo.UserTypeEnumInt,
|
||
QCChallengeId = qcChallenge.Id,
|
||
TalkContent = "CRC申请重传/上传影像"
|
||
});
|
||
|
||
await _qcChallengeRepository.SaveChangesAsync();
|
||
|
||
return ResponseOutput.Ok();
|
||
}
|
||
|
||
#endregion
|
||
|
||
|
||
|
||
/// <summary>
|
||
/// 上传界面 更新受试者首次给药日期 是否入组确认，以及访视 是否PD进展
|
||
/// </summary>
|
||
/// <param name="command"></param>
|
||
/// <returns></returns>
|
||
|
||
[HttpPut("{trialId:guid}")]
|
||
[TypeFilter(typeof(TrialResourceFilter))]
|
||
public async Task<IResponseOutput> UpdateSubjectAndSVInfo(UploadSubjectAndVisitCommand command)
|
||
{
|
||
var dbSubjectVisit = (await _subjectVisitRepository.FirstOrDefaultAsync(t => t.Id == command.SubjectVisitId)).IfNullThrowException();
|
||
|
||
dbSubjectVisit.PDState = command.PDState;
|
||
|
||
if (command.IsEnrollmentConfirm != null)
|
||
{
|
||
if (await _subjectVisitRepository.Where(t => t.Id == command.SubjectVisitId)
|
||
.AnyAsync(t => t.SubmitState == SubmitStateEnum.Submitted && t.IsEnrollmentConfirm != command.IsEnrollmentConfirm))
|
||
{
|
||
return ResponseOutput.NotOk("CRC已提交了 不能修改入组确认状态");
|
||
}
|
||
|
||
if (await _subjectVisitRepository.Where(t => t.Id == command.SubjectVisitId)
|
||
.AnyAsync(t => t.IsEnrollmentConfirm != command.IsEnrollmentConfirm && t.RequestBackState == RequestBackStateEnum.PM_AgressBack))
|
||
{
|
||
return ResponseOutput.NotOk("回退的访视，不允许修改PD确认状态");
|
||
}
|
||
|
||
dbSubjectVisit.IsEnrollmentConfirm = command.IsEnrollmentConfirm.Value;
|
||
|
||
|
||
|
||
|
||
|
||
}
|
||
|
||
if (command.SubjectFirstGiveMedicineTime != null)
|
||
{
|
||
|
||
await _subjectRepository.UpdatePartialFromQueryAsync(command.SubjectId, u => new Subject() { FirstGiveMedicineTime = command.SubjectFirstGiveMedicineTime, });
|
||
|
||
|
||
List<DataInspection> datas = new List<DataInspection>();
|
||
|
||
if (dbSubjectVisit.IsBaseLine)
|
||
{
|
||
datas.Add(new DataInspection()
|
||
{
|
||
|
||
SubjectId = command.SubjectId,
|
||
SiteId = dbSubjectVisit.SiteId,
|
||
TrialId = dbSubjectVisit.TrialId,
|
||
IsSign = false,
|
||
Identification = "Edit|Subject|Info|Subject",
|
||
CreateTime = DateTime.Now.AddSeconds(1),
|
||
JsonDetail = command.ToJcJson()
|
||
});
|
||
}
|
||
|
||
|
||
await _inspectionService.AddListInspectionRecordAsync(datas);
|
||
}
|
||
|
||
await _subjectVisitRepository.SaveChangesAsync();
|
||
|
||
return ResponseOutput.Ok();
|
||
}
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
[HttpPost("{trialId:guid}")]
|
||
public async Task<IResponseOutput> ForwardSVDicomImage(Guid[] subjectVisitIdList)
|
||
{
|
||
|
||
bool isSuccess = false;
|
||
List<DataInspection> datas = new List<DataInspection>();
|
||
|
||
foreach (var subjectVisitId in subjectVisitIdList)
|
||
{
|
||
|
||
|
||
var info = await _subjectVisitRepository.Where(t => t.Id == subjectVisitId).ProjectTo<DicomTrialSiteSubjectInfo>(_mapper.ConfigurationProvider).FirstOrDefaultAsync();
|
||
Dictionary<string, object> keyValuePairs = new Dictionary<string, object>() {
|
||
{"SubmitState",info.SubmitState },
|
||
{ "AuditState",info.AuditState},
|
||
{ "CheckState",info.CheckState},
|
||
{ "ForwardState",info.ForwardState}
|
||
|
||
};
|
||
DataInspection data = new DataInspection()
|
||
{
|
||
TrialId = info.TrialId,
|
||
SiteId = info.SiteId,
|
||
SubjectId = info.SubjectId,
|
||
SubjectVisitId = subjectVisitId,
|
||
Identification = "Edit|Visit|Status|Visit-Image Forward"
|
||
};
|
||
var targetPath = "/IMPORT-IMAGES/" + info.TrialCode + "_" + info.SubjectCode + "_" + info.VisitName;
|
||
|
||
var path = _dicomFileStoreHelper.GetSubjectVisitPath(info.TrialId, info.SiteId, info.SubjectId, info.SubjectVisitId);
|
||
|
||
try
|
||
{
|
||
// 主机及端口信息后面可以改到 配置文件
|
||
SessionOptions sessionOptions = new SessionOptions
|
||
{
|
||
Protocol = Protocol.Sftp,
|
||
PortNumber = 8022,
|
||
HostName = "CS-690-sftp.mint-imaging.com",
|
||
UserName = "zdong",
|
||
Password = "Everest@2021",
|
||
SshHostKeyFingerprint = @"ecdsa-sha2-nistp384 384 59gkjJ5lMwv3jsB8Wz2B35tBAIor5pSd8PcJYtoamPo="
|
||
};
|
||
|
||
using (Session session = new Session())
|
||
{
|
||
var studyFolders = (new DirectoryInfo(path)).GetDirectories();
|
||
|
||
session.Open(sessionOptions);
|
||
|
||
if (!session.FileExists(targetPath))
|
||
{
|
||
session.CreateDirectory(targetPath);
|
||
}
|
||
|
||
foreach (var studyFolder in studyFolders)
|
||
{
|
||
var targetFolder = Path.Combine(targetPath, studyFolder.Name);
|
||
|
||
if (!session.FileExists(targetFolder))
|
||
{
|
||
session.CreateDirectory(targetFolder);
|
||
}
|
||
|
||
foreach (var file in studyFolder.GetFiles())
|
||
{
|
||
if (file.Extension.Contains("dcm", StringComparison.OrdinalIgnoreCase))
|
||
{
|
||
string remoteFilePath =
|
||
RemotePath.TranslateLocalPathToRemote(file.FullName, studyFolder.FullName, targetFolder);
|
||
|
||
var result = session.PutFiles(file.FullName, remoteFilePath, false);
|
||
|
||
if (!result.IsSuccess)
|
||
{
|
||
await _subjectVisitRepository.BatchUpdateNoTrackingAsync(t => t.Id == subjectVisitId,
|
||
u => new SubjectVisit() { ForwardState = ForwardStateEnum.ForwardFailed });
|
||
|
||
return ResponseOutput.NotOk("Forward Failed" + result.Failures.ToString() + result.ToJson());
|
||
}
|
||
}
|
||
}
|
||
}
|
||
|
||
}
|
||
await _subjectVisitRepository.BatchUpdateNoTrackingAsync(t => t.Id == subjectVisitId,
|
||
u => new SubjectVisit() { ForwardState = ForwardStateEnum.Forwarded, ForwardUserId = _userInfo.Id, ForwardTime = DateTime.Now });
|
||
|
||
isSuccess = true;
|
||
keyValuePairs["ForwardState"] = ForwardStateEnum.Forwarded;
|
||
}
|
||
catch (Exception e)
|
||
{
|
||
|
||
await _subjectVisitRepository.BatchUpdateNoTrackingAsync(t => t.Id == subjectVisitId,
|
||
u => new SubjectVisit() { ForwardState = ForwardStateEnum.ForwardFailed });
|
||
keyValuePairs["ForwardState"] = ForwardStateEnum.ForwardFailed;
|
||
|
||
return ResponseOutput.NotOk("转发失败 " + e.Message);
|
||
}
|
||
|
||
|
||
|
||
data.JsonDetail = JsonConvert.SerializeObject(keyValuePairs);
|
||
datas.Add(data);
|
||
}
|
||
|
||
// 这里使用的是批量更新
|
||
await _subjectVisitRepository.AddListInspectionRecordAsync(datas);
|
||
|
||
await _subjectVisitRepository.SaveChangesAsync();
|
||
|
||
return isSuccess ? ResponseOutput.Ok() : ResponseOutput.NotOk("转发失败");
|
||
}
|
||
|
||
|
||
|
||
|
||
}
|
||
}
|