305 lines
13 KiB
C#
305 lines
13 KiB
C#
using IRaCIS.Core.Infrastructure.ExpressionExtend;
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using IRaCIS.Core.Application.Filter;
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using Microsoft.AspNetCore.Mvc;
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using IRaCIS.Core.Application.Contracts.Dicom.DTO;
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using Microsoft.AspNetCore.Authorization;
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using IRaCIS.Core.Domain.Share;
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using IRaCIS.Core.Application.Contracts;
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using IRaCIS.Core.Application.Interfaces;
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using IRaCIS.Core.Application.Service.Inspection.Interface;
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using Newtonsoft.Json;
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namespace IRaCIS.Core.Application.Services
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{
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[ApiExplorerSettings(GroupName = "Trial")]
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public class SubjectVisitService : BaseService, ISubjectVisitService
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{
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private readonly IRepository<SubjectVisit> _subjectVisitRepository;
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private readonly IInspectionService _inspectionService;
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private readonly IRepository<Subject> _subjectRepository;
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public SubjectVisitService(IRepository<SubjectVisit> subjectVisitRepository, IInspectionService inspectionService,IRepository<Subject> subjectRepository)
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{
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_subjectVisitRepository = subjectVisitRepository;
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this._inspectionService = inspectionService;
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_subjectRepository = subjectRepository;
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}
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[HttpPost]
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[TypeFilter(typeof(TrialResourceFilter))]
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[UnitOfWork]
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public async Task<IResponseOutput<string>> AddOrUpdateSV(SubjectVisitCommand svCommand)
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{
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bool isadd=false;
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if (svCommand.Id == null)
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{
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isadd=true;
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}
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var verifyExp1 = new EntityVerifyExp<SubjectVisit>()
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{
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VerifyExp = t => t.VisitNum == svCommand.VisitNum && t.SubjectId == svCommand.SubjectId,
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VerifyMsg = "This subject's visit plan already contains a visit with the same visitnum."
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};
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var verifyExp2 = new EntityVerifyExp<SubjectVisit>()
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{
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VerifyExp = t => t.SubjectId == svCommand.SubjectId && t.IsFinalVisit,
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VerifyMsg = "该受试者已经有访视设置为末次访视，不允许将该访视设置为末次访视",
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IsVerify=svCommand.IsFinalVisit
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};
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svCommand.BlindName = "B" + ((int)(svCommand.VisitNum * 10)).ToString("D3");
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var subject = (await _subjectRepository.FirstOrDefaultAsync(t => t.Id == svCommand.SubjectId)).IfNullThrowException();
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svCommand.VisitExecuted = svCommand.IsLostVisit ? VisitExecutedEnum.Executed : svCommand.VisitExecuted;
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//设置末次评估后，不允许添加计划外访视
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if (svCommand.InPlan == false && svCommand.Id == null)
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{
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if (await _subjectVisitRepository.AnyAsync(t => t.SubjectId == svCommand.SubjectId && t.IsFinalVisit))
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{
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return ResponseOutput.NotOk("设置末次评估后，不允许添加计划外访视");
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}
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}
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//更新的时候，返回的是数据库此时的实体数据
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var needDealEntity = await _subjectVisitRepository.InsertOrUpdateAsync(svCommand, false, verifyExp1, verifyExp2);
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if (svCommand.PDState != needDealEntity.PDState && svCommand.Id != null && needDealEntity.SubmitState == SubmitStateEnum.Submitted)
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{
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return ResponseOutput.NotOk("CRC提交后，不允许修改PD确认状态");
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}
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if (svCommand.PDState != needDealEntity.PDState && svCommand.Id != null && needDealEntity.RequestBackState == RequestBackStateEnum.PM_AgressBack)
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{
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return ResponseOutput.NotOk("回退的访视，不允许修改PD确认状态");
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}
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if (svCommand.IsFinalVisit)
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{
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if (await _subjectVisitRepository.AnyAsync(t => t.SubjectId == svCommand.SubjectId && t.VisitNum > svCommand.VisitNum && t.SubmitState == SubmitStateEnum.ToSubmit))
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{
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return ResponseOutput.NotOk("该受试者此访视后有影像上传，该访视不允许设置为末次访视");
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}
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subject.Status = SubjectStatus.OutOfVisit;
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//末次访视后的 访视设置为不可用
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await _subjectVisitRepository.BatchUpdateAsync(t => t.SubjectId == svCommand.SubjectId && t.VisitNum > svCommand.VisitNum, u => new SubjectVisit() { VisitExecuted = VisitExecutedEnum.Unavailable });
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}
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else
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{
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//回退
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subject.Status = SubjectStatus.OnVisit;
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await _subjectVisitRepository.BatchUpdateAsync(t => t.SubjectId == svCommand.SubjectId && t.VisitExecuted == VisitExecutedEnum.Unavailable, u => new SubjectVisit() { VisitExecuted = VisitExecutedEnum.UnExecuted });
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}
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if (svCommand.IsLostVisit && svCommand.Id == null)
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{
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if (await _subjectVisitRepository.AnyAsync(t => t.Id==svCommand.Id && t.SubmitState == SubmitStateEnum.ToSubmit))
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{
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return ResponseOutput.NotOk("该受试者此访视有影像上传，不允许设置为失访");
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}
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}
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//更新受试者 首次给药日期 是否入组确认
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if (svCommand.SubjectFirstGiveMedicineTime != null)
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{
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if (svCommand.IsBaseLine)
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{
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List<DataInspection> datas = new List<DataInspection>();
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// 更新受试者
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subject.FirstGiveMedicineTime = svCommand.SubjectFirstGiveMedicineTime;
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datas.Add(new DataInspection()
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{
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SubjectId = subject.Id,
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SiteId = subject.SiteId,
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TrialId = subject.TrialId,
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IsSign = false,
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Identification = "Edit|Subject|Info|Subject",
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CreateTime = DateTime.Now.AddSeconds(1),
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JsonDetail = JsonConvert.SerializeObject(new
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{
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FirstGiveMedicineTime = subject.FirstGiveMedicineTime.Value.ToString("yyyy-MM-dd")
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})
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});
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await _inspectionService.AddListInspectionRecordAsync(datas);
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}
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}
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if (svCommand.IsEnrollmentConfirm != null)
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{
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await _subjectVisitRepository.BatchUpdateAsync(t => t.SubjectId == svCommand.SubjectId && t.IsBaseLine , u => new SubjectVisit() { IsEnrollmentConfirm = svCommand.IsEnrollmentConfirm.Value });
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//needDealEntity.IsUrgent = true;
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}
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await _repository.SaveChangesAsync();
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if (isadd)
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{
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List<DataInspection> dataInspection=new List<DataInspection>();
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dataInspection.Add(new DataInspection()
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{
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TrialId = svCommand.TrialId,
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SiteId = svCommand.SiteId,
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SubjectId = svCommand.SubjectId,
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SubjectVisitId = svCommand.Id,
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SubjectVisitName = svCommand.VisitName,
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IsSign = false,
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CreateTime = DateTime.Now.AddSeconds(1),
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Identification = "Init|Visit|Status|Visit-Image Upload",
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JsonDetail = JsonConvert.SerializeObject(new
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{
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VisitName = svCommand.VisitName,
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SubmitState = "",
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AuditState = "",
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})
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});
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await _inspectionService.AddListInspectionRecordAsync(dataInspection);
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}
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// 保存数据后，重新算下是否缺失影像 应对状态撤回
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//if (svCommand.IsLostVisit == false)
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//{
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// var currentSubmittedVisitNum = await _repository.Where<SubjectVisit>(t => t.SubmitState == SubmitStateEnum.Submitted).MaxAsync(t => t.VisitNum);
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// var isMissing = await _repository.AnyAsync<SubjectVisit>(t => (t.VisitNum < currentSubmittedVisitNum && t.SubmitState != SubmitStateEnum.Submitted) || t.IsLostVisit);
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// await _repository.UpdateFromQueryAsync<Subject>(t => t.Id == svCommand.SubjectId, u => new Subject()
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// {
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// IsMissingImages = isMissing
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// });
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//}
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return ResponseOutput.Ok(needDealEntity.Id.ToString());
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}
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[HttpPut("{trialId:guid}/{subjectVisitId:guid}/{isUrgent:bool}")]
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public async Task<IResponseOutput> SetSubjectVisitUrgent(Guid subjectVisitId, bool isUrgent)
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{
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await _subjectVisitRepository.BatchUpdateAsync(t => t.Id == subjectVisitId, u => new SubjectVisit() { IsUrgent = isUrgent });
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return ResponseOutput.Ok();
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}
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[HttpDelete, Route("{id:guid}/{trialId:guid}")]
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[TrialAudit(AuditType.SubjectAudit, AuditOptType.DeleteSubjectOutPlanVisit)]
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[TypeFilter(typeof(TrialResourceFilter))]
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public async Task<IResponseOutput> DeleteSV(Guid id)
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{
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if (await _repository.AnyAsync<DicomStudy>(t => t.SubjectVisitId == id))
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{
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return ResponseOutput.NotOk("This visit is associated with the uploaded study images and couldn't be deleted.");
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}
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if (await _subjectVisitRepository.AnyAsync(t => t.Id == id && t.InPlan))
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{
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return ResponseOutput.NotOk("This visit is InPlan and couldn't be deleted.");
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}
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if (await _subjectVisitRepository.AnyAsync(t => t.OutPlanPreviousVisitId == id ))
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{
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return ResponseOutput.NotOk("This visit is OutPlanPreviousVisitId and couldn't be deleted.");
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}
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return ResponseOutput.Result(await _repository.BatchDeleteAsync<SubjectVisit>(s => s.Id == id));
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}
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/// <summary>
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/// 设置受试者访视已执行 也就是将studyUploaded状态置为true 为了那些没有影像 人工设置准备
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/// </summary>
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/// <param name="subjectVisitId"></param>
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/// <returns></returns>
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[HttpPost("{subjectVisitId:guid}/{trialId:guid}")]
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[TrialAudit(AuditType.SubjectAudit, AuditOptType.SetSVExecuted)]
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[TypeFilter(typeof(TrialResourceFilter))]
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public async Task<IResponseOutput> SetSVExecuted(Guid subjectVisitId)
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{
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return ResponseOutput.Result(await _subjectVisitRepository.BatchUpdateAsync(s => s.Id == subjectVisitId, u => new SubjectVisit() { VisitExecuted = VisitExecutedEnum.Executed }));
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}
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/// <summary>
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/// 获取访视下的Dicom 检查信息 分所有的， 阅片的 不阅片 isReading : 0 查询所有 1 查询仅仅阅片的
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/// </summary>
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/// <param name="trialId"></param>
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/// <param name="sujectVisitId"></param>
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/// <param name="isReading"></param>
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/// <returns></returns>
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[HttpGet, Route("{trialId:guid}/{sujectVisitId:guid}/{isReading}")]
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[AllowAnonymous]
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public async Task<List<VisitStudyDTO>> GetVisitStudyList(Guid trialId, Guid sujectVisitId, int isReading)
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{
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var studyList = await _repository.Where<DicomStudy>(t => t.TrialId == trialId && t.SubjectVisitId == sujectVisitId).Select(k => new VisitStudyDTO()
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{
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InstanceCount = k.InstanceCount,
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Modalities = k.Modalities,
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SeriesCount = k.SeriesCount,
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StudyCode = k.StudyCode,
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StudyId = k.Id
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}).ToListAsync();
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var studyIds = studyList.Select(t => t.StudyId).ToList();
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var instanceList = await _repository.Where<DicomInstance>(t => studyIds.Contains(t.StudyId))
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.Select(t => new { t.SeriesId, t.Id, t.InstanceNumber }).ToListAsync();
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foreach (var t in studyList)
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{
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t.SeriesList = await _repository.Where<DicomSeries>(s => s.StudyId == t.StudyId)
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.WhereIf(isReading == 1, s => s.IsReading).OrderBy(s => s.SeriesNumber).
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ThenBy(s => s.SeriesTime)
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.ProjectTo<DicomSeriesDTO>(_mapper.ConfigurationProvider).ToListAsync();
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t.SeriesList.ForEach(series => series.InstanceList = instanceList.Where(t => t.SeriesId == series.Id).OrderBy(t => t.InstanceNumber).Select(k => k.Id).ToList());
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//设置为阅片与否 不更改数据库检查 的instance数量 和 SeriesCount 所以这里要实时统计
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t.SeriesCount = t.SeriesList.Count();
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t.InstanceCount = t.SeriesList.SelectMany(t => t.InstanceList).Count();
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}
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return studyList;
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//return ResponseOutput.Ok(studyList.Where(t => t.SeriesList.Count > 0).ToList());
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}
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}
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}
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