irc_web/src/utils/parseDicom.js

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import * as dicomParser from "dicom-parser";
import * as cornerstone from "cornerstone-core";
import * as cornerstoneWADOImageLoader from "cornerstone-wado-image-loader";
cornerstoneWADOImageLoader.external.dicomParser = dicomParser;
cornerstoneWADOImageLoader.external.cornerstone = cornerstone;
import { convertBytes } from "@/utils/dicom-character-set";
import Vue from 'vue';
import { dcmUpload } from "@/utils/dcmUpload/dcmUpload";
let dicom = {
PatientName: "x00100010", // 患者姓名
PatientId: "x00100020", // 患者ID
PatientBirthDate: "x00100030", // 患者出生日期
PatientBirthTime: "x00100032", // 患者出生时间
PatientSex: "x00100040", // 患者性别
PatientWeight: "x00101030", // 患者体重
PregnancyStatus: "x001021c0", // 怀孕状态
PatientAge: "x00101010", // 患者年龄(做检查时刻的患者年龄,而不是此刻患者的真实年龄)
AcquisitionTime: "x00080032",
AcquisitionNumber: "x00200012",
TriggerTime: "x00181060",
AccessionNumber: "x00080050", // 检查号
StudyId: "x00200010", // 检查ID
StudyInstanceUid: "x0020000d", // 检查实例号
StudyDate: "x00080020", // 检查日期
StudyTime: "x00080030", // 检查时间
Modalities: "x00080061", // 一个检查中含有的不同检查类型
BodyPartExamined: "x00080015", // 检查的部位
StudyDescription: "x00081030", // 检查的描述
InstitutionName: "x00080080",
SeriesNumber: "x00200011", // 序列号
SeriesInstanceUid: "x0020000e", // 序列实例号
Modality: "x00080060", // 检查模态
SeriesDescription: "x0008103e", // 检查描述和说明
SeriesDate: "x00080021", // 检查日期
SeriesTime: "x00080031", // 检查时间
SequenceName: "x00180024",
ProtocolName: "x00181030",
ImagePosition: "x00200032", // 图像位置
ImageOrientation: "x00200037", // 图像方位
ImagePixelSpacing: "x00181164",
SliceThickness: "x00180050", // 层厚
SpacingBetweenSlices: "x00180088", // 层间距
SliceLocation: "x00201041", // 相对位置
MRAcquisition: "x00180023",
seriesBodyPartExamined: "x00180015", // 身体部位
ImageType: "x00080008",
SopInstanceUid: "x00080018", // SOP实例UID
ContentDate: "x00080023", // 影像拍摄日期
ContentTime: "x00080033", // 影像拍摄时间
ImageOrInstanceNumber: "x00200013", // 图像码
SamplesPerPixel: "x00280002", // 图像采样率
PhotometricInterpretation: "x00280004", // 光度计对于CT图像用两个枚举值MONOCHROME1MONOCHROME2 用来判断图像是否是彩色的MONOCHROME 1/2是灰度图RGB则是真彩色图
Rows: "x00280010", // 行数
Columns: "x00280011", // 列数
NumberOfFrames: "x00280008",
PixelSpacing: "x00280030", // 像素间距
BitsAllocated: "x00280100", // 分配的位数
BitsStored: "x00280101", // 存储的位数
HighBit: "x00280102", // 高位
PixelRepresentation: "x00280103", // 像素数据的表现类型一个枚举值分别为十六进制数0000和0001.0000H = 无符号整型0001H = 2的补码
WindowCenter: "x00281050", // 窗位
WindowWidth: "x002811051", // 窗宽
RescaleIntercept: "x00281052", // 截距
RescaleSlope: "x00281053", // 斜率
RescaleType: "x00281054", // 输出值的单位
ParsingFormat: "x00080005",
FrameOfReferenceUID: "x00200052",
};
// 需要设置默认值
let defaultKey = ['Rows', 'Columns', 'SliceLocation', 'NumberOfFrames'];
let uintKey = ['Rows', 'Columns'];
let intStringKey = ['SliceLocation', 'NumberOfFrames'];
// 需要格式解析
let pormatParseKey = ['PatientName', 'SeriesDescription', 'StudyDescription'];
// 解析dicom文件
export const parseDicom = (file, name = false) => {
return new Promise(function (resolve) {
let reader = new FileReader();
reader.onload = function (e) {
try {
let data = dicomParser.parseDicom(new Uint8Array(e.target.result));
let res = {};
if (name && Array.isArray(name)) {
name.forEach((item) => {
if (dicom[item]) {
res[item] = data.string(dicom[item]) || '';
}
});
} else if (name) {
if (dicom[name]) {
res[name] = data.string(dicom[name]) || '';
} else {
console.log("name is inexistence");
resolve(false)
}
} else {
Object.keys(dicom).forEach((key) => {
res[key] = data.string(dicom[key]) || '';
});
}
pormatParseKey.forEach(key => {
if (res[key]) {
const Element = data.elements[dicom[key]];
const Bytes = new Uint8Array(
data.byteArray.buffer,
Element ? Element.dataOffset : 0,
Element ? Element.length : 0
);
res[key] = convertBytes(
res.ParsingFormat,
Bytes
);
}
})
uintKey.forEach(key => {
res[key] = data.uint16(dicom[key])
})
intStringKey.forEach(key => {
res[key] = data.intString(dicom[key])
})
defaultKey.forEach(key => {
if (!res[key] && res.hasOwnProperty(key)) {
res[key] = 0;
}
})
resolve(res);
} catch (error) {
console.log(error)
resolve(false);
}
};
reader.onerror = function (e) {
console.log(e)
resolve(false);
};
reader.readAsArrayBuffer(file);
});
};
// 影像上传
// 影像上传
export const dicomToOSS = async (file, path) => {
try {
let res = await dcmUpload(path, file);
if (!res || !res.url) return false;
return Vue.prototype.$getObjectName(res.url);
} catch (err) {
console.log(err);
return false;
}
};
// 获取缩略图
export const getThumbnail = async (file, ossPath, dicomInfo) => {
try {
if (dicomInfo.modality !== "SR") {
let fileId = cornerstoneWADOImageLoader.wadouri.fileManager.add(file);
let blob = await dicomToPng(
fileId,
dicomInfo.Columns,
dicomInfo.Rows
);
if (!blob) return "";
let OSSclient = Vue.prototype.OSSclient;
let seriesRes = await OSSclient.put(ossPath, blob);
if (seriesRes && seriesRes.url) {
return Vue.prototype.$getObjectName(seriesRes.url);
} else {
return "";
}
} else {
return "";
}
} catch (err) {
console.log(err);
return "";
}
};
const canvasToBlob = (canvas) => {
return new Promise((resolve) => {
canvas.toBlob((blob) => {
resolve(blob);
});
});
};
const dicomToPng = (imageId, width, height) => {
return new Promise((resolve) => {
cornerstone.loadImage(imageId).then(async (image) => {
let canvas = document.createElement("canvas");
canvas.width = width;
canvas.height = height;
if (image) {
cornerstone.renderToCanvas(canvas, image);
// 将 Canvas 图像对象转换为 PNG 格式
let blob = await canvasToBlob(canvas);
resolve(blob);
} else {
resolve(false);
}
});
}).catch((reason) => {
reason();
});
};